Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MTND5P20-201ENST00000448677 143 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 RPS27P1-201ENST00000450552 247 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 AC091951.2-201ENST00000500762 203 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 AC097462.1-201ENST00000514125 324 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 RNA5SP20-201ENST00000515976 84 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 RNU6-277P-201ENST00000516272 106 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.67□□□□□ -2.14
HOXD13P35453 MIR4303-201ENST00000581299 66 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 AC022217.4-201ENST00000604389 163 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 AC087588.2-201ENST00000617667 426 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 AC095038.3-201ENST00000634439 195 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 SNORD1A-201ENST00000364968 72 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 RNU6-407P-201ENST00000365280 104 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 RNU6-203P-201ENST00000384038 104 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 RNU6-1031P-201ENST00000384773 107 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 RNU6-440P-201ENST00000390882 105 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 AC236972.2-201ENST00000434979 310 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 snoU13.23-201ENST00000458863 104 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.66□□□□□ -2.14
HOXD13P35453 AC105758.1-201ENST00000506038 399 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 FGF7P4-201ENST00000509595 295 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 RNU6-120P-201ENST00000516077 103 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 RNU6-970P-201ENST00000516312 107 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 RNU6-875P-201ENST00000516488 106 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 RNU7-128P-201ENST00000517247 62 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 AL442163.3-201ENST00000554110 156 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 AC015712.3-201ENST00000559380 164 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 SNORA28-201ENST00000606769 126 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 MIR7843-201ENST00000622274 79 ntBASIC1.66□□□□□ -2.14
HOXD13P35453 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HOXD13P35453 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
HOXD13P35453 SNORA27.1-201ENST00000362604 124 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 RNU1-22P-201ENST00000363334 158 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 RNU6-60P-201ENST00000364792 103 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 MIR194-1-201ENST00000384892 85 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 AL355796.1-201ENST00000406706 323 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 PGBD4P5-201ENST00000445958 426 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 FCF1P4-201ENST00000448326 183 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 RNU6-408P-201ENST00000515910 100 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 RNU6-1278P-201ENST00000516130 107 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 RNU6-911P-201ENST00000516523 104 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 RNU6-548P-201ENST00000517083 115 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 Y_RNA.718-201ENST00000517110 102 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.65□□□□□ -2.15
HOXD13P35453 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.65□□□□□ -2.15
HOXD13P35453 AC015688.6-201ENST00000577737 104 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 MIR3937-201ENST00000580135 106 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 AC073413.2-201ENST00000604332 360 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 AC084781.2-201ENST00000615568 161 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 MIR6715A-201ENST00000615929 79 ntBASIC1.65□□□□□ -2.15
HOXD13P35453 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HOXD13P35453 MIR302D-201ENST00000362275 68 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 RNU6-457P-201ENST00000363999 107 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 Y_RNA.263-201ENST00000364659 114 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 RNU6-1040P-201ENST00000383974 107 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 RNY3P4-201ENST00000384428 101 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 MIR513A1-201ENST00000385138 129 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 MIR873-201ENST00000401120 77 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 MRPL35P1-201ENST00000404272 572 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 AC018865.2-201ENST00000423631 129 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 RNU7-169P-201ENST00000459456 61 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 Y_RNA.702-201ENST00000516843 96 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 AC006380.1-201ENST00000603598 186 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 AC040896.1-201ENST00000613819 479 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 U2.1-201ENST00000618978 145 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 AL121890.5-201ENST00000620848 304 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 MIR6079-201ENST00000635807 62 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 U6.115-201ENST00000636045 103 ntBASIC1.64□□□□□ -2.15
HOXD13P35453 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.64□□□□□ -2.15
HOXD13P35453 SNORD114-7-201ENST00000362520 77 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 RNU1-42P-201ENST00000364033 160 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 Y_RNA.356-201ENST00000365475 113 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 Y_RNA.428-201ENST00000384078 102 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 RNU6-376P-201ENST00000384731 106 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 SNORD78.2-201ENST00000391076 69 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 MIR1304-201ENST00000408243 91 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 AC027119.1-201ENST00000440877 241 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 AL606517.2-201ENST00000442855 241 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 SNORA70.12-201ENST00000516084 153 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 SNORA31.10-201ENST00000516482 106 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXD13P35453 AL355375.2-201ENST00000574825 175 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 AP001485.1-201ENST00000604799 199 ntBASIC1.63□□□□□ -2.15
HOXD13P35453 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.62□□□□□ -2.15
HOXD13P35453 Y_RNA.187-201ENST00000363918 113 ntBASIC1.62□□□□□ -2.15
HOXD13P35453 Y_RNA.303-201ENST00000364998 94 ntBASIC1.62□□□□□ -2.15
HOXD13P35453 RNA5SP259-201ENST00000365541 109 ntBASIC1.62□□□□□ -2.15
HOXD13P35453 MIR517C-201ENST00000385103 95 ntBASIC1.62□□□□□ -2.15
HOXD13P35453 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.62□□□□□ -2.15
HOXD13P35453 SNX2P2-201ENST00000424553 323 ntBASIC1.62□□□□□ -2.15
HOXD13P35453 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXD13P35453 SNORD116.3-201ENST00000517176 78 ntBASIC1.62□□□□□ -2.15
HOXD13P35453 AC015720.1-201ENST00000565251 277 ntBASIC1.62□□□□□ -2.15
HOXD13P35453 AC021506.2-201ENST00000612354 169 ntBASIC1.62□□□□□ -2.15
HOXD13P35453 AC127459.3-201ENST00000624328 466 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms