Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RN7SL330P-201ENST00000469709 307 ntBASIC3.56□□□□□ -1.84
GPC1P35052 RN7SL323P-201ENST00000494712 295 ntBASIC3.56□□□□□ -1.84
GPC1P35052 RNU6-991P-201ENST00000516168 107 ntBASIC3.56□□□□□ -1.84
GPC1P35052 RN7SKP83-201ENST00000516512 178 ntBASIC3.56□□□□□ -1.84
GPC1P35052 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.56□□□□□ -1.84
GPC1P35052 ZNF271P-202ENST00000465539 1970 ntBASIC3.56□□□□□ -1.84
GPC1P35052 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GPC1P35052 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
GPC1P35052 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GPC1P35052 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GPC1P35052 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GPC1P35052 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.55□□□□□ -1.84
GPC1P35052 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GPC1P35052 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.55□□□□□ -1.84
GPC1P35052 AC080128.1-201ENST00000474389 1917 ntBASIC3.55□□□□□ -1.84
GPC1P35052 Y_RNA.242-201ENST00000364473 110 ntBASIC3.55□□□□□ -1.84
GPC1P35052 Y_RNA.344-201ENST00000365381 112 ntBASIC3.55□□□□□ -1.84
GPC1P35052 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
GPC1P35052 SNORA3.3-201ENST00000408712 125 ntBASIC3.55□□□□□ -1.84
GPC1P35052 PGBD4P5-201ENST00000445958 426 ntBASIC3.55□□□□□ -1.84
GPC1P35052 AC107297.1-201ENST00000459991 176 ntBASIC3.55□□□□□ -1.84
GPC1P35052 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.55□□□□□ -1.84
GPC1P35052 MIR4286-201ENST00000580651 93 ntBASIC3.55□□□□□ -1.84
GPC1P35052 AC007229.1-201ENST00000590455 412 ntBASIC3.55□□□□□ -1.84
GPC1P35052 SNORA51-201ENST00000606420 132 ntBASIC3.55□□□□□ -1.84
GPC1P35052 MIR6875-201ENST00000617506 72 ntBASIC3.55□□□□□ -1.84
GPC1P35052 UCA1.1-201ENST00000620952 75 ntBASIC3.55□□□□□ -1.84
GPC1P35052 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GPC1P35052 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GPC1P35052 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GPC1P35052 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GPC1P35052 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
GPC1P35052 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GPC1P35052 Y_RNA.78-201ENST00000362970 110 ntBASIC3.54□□□□□ -1.84
GPC1P35052 RNU1-96P-201ENST00000364163 162 ntBASIC3.54□□□□□ -1.84
GPC1P35052 Y_RNA.298-201ENST00000364960 107 ntBASIC3.54□□□□□ -1.84
GPC1P35052 RNU6-1189P-201ENST00000383958 107 ntBASIC3.54□□□□□ -1.84
GPC1P35052 RNU11-5P-201ENST00000391216 129 ntBASIC3.54□□□□□ -1.84
GPC1P35052 MIR548O-201ENST00000408583 114 ntBASIC3.54□□□□□ -1.84
GPC1P35052 AL161788.1-201ENST00000441805 169 ntBASIC3.54□□□□□ -1.84
GPC1P35052 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.54□□□□□ -1.84
GPC1P35052 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.54□□□□□ -1.84
GPC1P35052 RNU6-904P-201ENST00000516206 101 ntBASIC3.54□□□□□ -1.84
GPC1P35052 RNU6-856P-201ENST00000516959 98 ntBASIC3.54□□□□□ -1.84
GPC1P35052 CYCSP30-201ENST00000546447 172 ntBASIC3.54□□□□□ -1.84
GPC1P35052 AC004486.1-201ENST00000546846 233 ntBASIC3.54□□□□□ -1.84
GPC1P35052 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.54□□□□□ -1.84
GPC1P35052 MIR1254-2-201ENST00000579553 63 ntBASIC3.54□□□□□ -1.84
GPC1P35052 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.54□□□□□ -1.84
GPC1P35052 AC134878.1-201ENST00000619901 243 ntBASIC3.54□□□□□ -1.84
GPC1P35052 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
GPC1P35052 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GPC1P35052 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GPC1P35052 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GPC1P35052 CEP170P1-201ENST00000502249 4587 ntBASIC3.53□□□□□ -1.84
GPC1P35052 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
GPC1P35052 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GPC1P35052 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GPC1P35052 RNA5SP424-201ENST00000390988 115 ntBASIC3.53□□□□□ -1.84
GPC1P35052 RNU6-1077P-201ENST00000410506 102 ntBASIC3.53□□□□□ -1.84
GPC1P35052 AC123900.1-201ENST00000420390 96 ntBASIC3.53□□□□□ -1.84
GPC1P35052 RPS12P18-201ENST00000442381 270 ntBASIC3.53□□□□□ -1.84
GPC1P35052 RNU7-164P-201ENST00000459221 62 ntBASIC3.53□□□□□ -1.84
GPC1P35052 RNU7-99P-201ENST00000516271 62 ntBASIC3.53□□□□□ -1.84
GPC1P35052 RNU6-158P-201ENST00000517104 100 ntBASIC3.53□□□□□ -1.84
GPC1P35052 AC074050.1-201ENST00000563247 211 ntBASIC3.53□□□□□ -1.84
GPC1P35052 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.53□□□□□ -1.84
GPC1P35052 MIR6079-201ENST00000635807 62 ntBASIC3.53□□□□□ -1.84
GPC1P35052 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
GPC1P35052 AP003122.5-201ENST00000527668 3766 ntBASIC3.53□□□□□ -1.84
GPC1P35052 AC091564.4-201ENST00000533934 2194 ntBASIC3.53□□□□□ -1.84
GPC1P35052 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
GPC1P35052 AC018630.2-201ENST00000534866 2403 ntBASIC3.53□□□□□ -1.84
GPC1P35052 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GPC1P35052 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GPC1P35052 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GPC1P35052 RNU6-349P-201ENST00000362402 107 ntBASIC3.52□□□□□ -1.85
GPC1P35052 Y_RNA.107-201ENST00000363190 121 ntBASIC3.52□□□□□ -1.85
GPC1P35052 Y_RNA.410-201ENST00000383992 113 ntBASIC3.52□□□□□ -1.85
GPC1P35052 MIR30B-201ENST00000384850 88 ntBASIC3.52□□□□□ -1.85
GPC1P35052 MIR548D2-201ENST00000384955 97 ntBASIC3.52□□□□□ -1.85
GPC1P35052 RNA5SP467-201ENST00000391274 118 ntBASIC3.52□□□□□ -1.85
GPC1P35052 AC109327.2-201ENST00000448339 378 ntBASIC3.52□□□□□ -1.85
GPC1P35052 RPL39P25-201ENST00000449384 154 ntBASIC3.52□□□□□ -1.85
GPC1P35052 CKS1BP2-201ENST00000497342 240 ntBASIC3.52□□□□□ -1.85
GPC1P35052 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.52□□□□□ -1.85
GPC1P35052 AC026421.1-201ENST00000519101 163 ntBASIC3.52□□□□□ -1.85
GPC1P35052 AC087685.1-201ENST00000587507 141 ntBASIC3.52□□□□□ -1.85
GPC1P35052 SNORA62.6-201ENST00000606322 83 ntBASIC3.52□□□□□ -1.85
GPC1P35052 AL590808.1-201ENST00000618696 141 ntBASIC3.52□□□□□ -1.85
GPC1P35052 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
GPC1P35052 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.52□□□□□ -1.85
GPC1P35052 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
GPC1P35052 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.51□□□□□ -1.85
GPC1P35052 Y_RNA.342-201ENST00000365352 113 ntBASIC3.51□□□□□ -1.85
GPC1P35052 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
GPC1P35052 AC093259.1-201ENST00000509755 300 ntBASIC3.51□□□□□ -1.85
GPC1P35052 Y_RNA.685-201ENST00000516532 108 ntBASIC3.51□□□□□ -1.85
GPC1P35052 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.51□□□□□ -1.85
GPC1P35052 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms