Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SCGB1D5P-201ENST00000515134 247 ntBASIC3.83□□□□□ -1.8
VARSP26640 RNU6-1291P-201ENST00000516591 104 ntBASIC3.83□□□□□ -1.8
VARSP26640 RNU6-586P-201ENST00000517265 104 ntBASIC3.83□□□□□ -1.8
VARSP26640 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.83□□□□□ -1.8
VARSP26640 MIR1248-201ENST00000629190 106 ntBASIC3.83□□□□□ -1.8
VARSP26640 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VARSP26640 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VARSP26640 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
VARSP26640 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.83□□□□□ -1.8
VARSP26640 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VARSP26640 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VARSP26640 RNU6-349P-201ENST00000362402 107 ntBASIC3.82□□□□□ -1.8
VARSP26640 RNU6-228P-201ENST00000362700 106 ntBASIC3.82□□□□□ -1.8
VARSP26640 RNU6-1124P-201ENST00000384169 107 ntBASIC3.82□□□□□ -1.8
VARSP26640 MIR767-201ENST00000390228 109 ntBASIC3.82□□□□□ -1.8
VARSP26640 Y_RNA.593-201ENST00000410292 98 ntBASIC3.82□□□□□ -1.8
VARSP26640 RPS29P7-201ENST00000439662 171 ntBASIC3.82□□□□□ -1.8
VARSP26640 AL500522.2-201ENST00000448562 343 ntBASIC3.82□□□□□ -1.8
VARSP26640 RNU7-164P-201ENST00000459221 62 ntBASIC3.82□□□□□ -1.8
VARSP26640 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.82□□□□□ -1.8
VARSP26640 RNA5SP490-201ENST00000517141 136 ntBASIC3.82□□□□□ -1.8
VARSP26640 RNA5SP179-201ENST00000517284 121 ntBASIC3.82□□□□□ -1.8
VARSP26640 AC004486.1-201ENST00000546846 233 ntBASIC3.82□□□□□ -1.8
VARSP26640 AC091167.4-201ENST00000605079 184 ntBASIC3.82□□□□□ -1.8
VARSP26640 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.82□□□□□ -1.8
VARSP26640 AC019176.2-201ENST00000611579 315 ntBASIC3.82□□□□□ -1.8
VARSP26640 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VARSP26640 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VARSP26640 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
VARSP26640 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VARSP26640 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VARSP26640 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VARSP26640 Y_RNA.242-201ENST00000364473 110 ntBASIC3.81□□□□□ -1.8
VARSP26640 RNU6-1104P-201ENST00000384723 104 ntBASIC3.81□□□□□ -1.8
VARSP26640 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VARSP26640 SNORA57.3-201ENST00000411095 141 ntBASIC3.81□□□□□ -1.8
VARSP26640 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VARSP26640 AC083863.1-201ENST00000438811 231 ntBASIC3.81□□□□□ -1.8
VARSP26640 AL445687.1-201ENST00000439946 251 ntBASIC3.81□□□□□ -1.8
VARSP26640 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.81□□□□□ -1.8
VARSP26640 SNORA4.4-201ENST00000515921 135 ntBASIC3.81□□□□□ -1.8
VARSP26640 RNU7-70P-201ENST00000516941 66 ntBASIC3.81□□□□□ -1.8
VARSP26640 DEFB131E-201ENST00000532329 154 ntBASIC3.81□□□□□ -1.8
VARSP26640 AL162726.3-218ENST00000636401 95 ntBASIC3.81□□□□□ -1.8
VARSP26640 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VARSP26640 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VARSP26640 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VARSP26640 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
VARSP26640 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.81□□□□□ -1.8
VARSP26640 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VARSP26640 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
VARSP26640 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VARSP26640 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VARSP26640 MIR126-201ENST00000362291 85 ntBASIC3.8□□□□□ -1.8
VARSP26640 Y_RNA.17-201ENST00000362433 111 ntBASIC3.8□□□□□ -1.8
VARSP26640 HMGN2P34-201ENST00000437647 269 ntBASIC3.8□□□□□ -1.8
VARSP26640 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.8□□□□□ -1.8
VARSP26640 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.8□□□□□ -1.8
VARSP26640 U2.20-201ENST00000613956 192 ntBASIC3.8□□□□□ -1.8
VARSP26640 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VARSP26640 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VARSP26640 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VARSP26640 SNORA63.1-201ENST00000362493 131 ntBASIC3.79□□□□□ -1.8
VARSP26640 RNY3P2-201ENST00000362918 102 ntBASIC3.79□□□□□ -1.8
VARSP26640 RNU4-36P-201ENST00000364294 144 ntBASIC3.79□□□□□ -1.8
VARSP26640 RNU6-1189P-201ENST00000383958 107 ntBASIC3.79□□□□□ -1.8
VARSP26640 Y_RNA.410-201ENST00000383992 113 ntBASIC3.79□□□□□ -1.8
VARSP26640 RPS15AP28-201ENST00000435088 386 ntBASIC3.79□□□□□ -1.8
VARSP26640 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.79□□□□□ -1.8
VARSP26640 PRSS3P4-201ENST00000453323 162 ntBASIC3.79□□□□□ -1.8
VARSP26640 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.79□□□□□ -1.8
VARSP26640 SCARNA23-201ENST00000516060 130 ntBASIC3.79□□□□□ -1.8
VARSP26640 CYCSP30-201ENST00000546447 172 ntBASIC3.79□□□□□ -1.8
VARSP26640 AC022523.2-201ENST00000561045 150 ntBASIC3.79□□□□□ -1.8
VARSP26640 MIR3163-201ENST00000581592 73 ntBASIC3.79□□□□□ -1.8
VARSP26640 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.79□□□□□ -1.8
VARSP26640 MIR6500-201ENST00000622700 86 ntBASIC3.79□□□□□ -1.8
VARSP26640 ZNF271P-202ENST00000465539 1970 ntBASIC3.79□□□□□ -1.8
VARSP26640 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.79□□□□□ -1.8
VARSP26640 ZNF720P1-201ENST00000562403 1939 ntBASIC3.79□□□□□ -1.8
VARSP26640 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VARSP26640 AC093010.3-201ENST00000570269 15214 ntBASIC3.78□□□□□ -1.8
VARSP26640 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.78□□□□□ -1.8
VARSP26640 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VARSP26640 RNU1-96P-201ENST00000364163 162 ntBASIC3.78□□□□□ -1.8
VARSP26640 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.78□□□□□ -1.8
VARSP26640 Y_RNA.267-201ENST00000364679 109 ntBASIC3.78□□□□□ -1.8
VARSP26640 Y_RNA.333-201ENST00000365274 102 ntBASIC3.78□□□□□ -1.8
VARSP26640 MIR802-201ENST00000390235 94 ntBASIC3.78□□□□□ -1.8
VARSP26640 MIR548O-201ENST00000408583 114 ntBASIC3.78□□□□□ -1.8
VARSP26640 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.78□□□□□ -1.8
VARSP26640 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.78□□□□□ -1.8
VARSP26640 ARF4P2-201ENST00000430209 526 ntBASIC3.78□□□□□ -1.8
VARSP26640 AP001486.1-201ENST00000463339 476 ntBASIC3.78□□□□□ -1.8
VARSP26640 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.78□□□□□ -1.8
VARSP26640 RNU7-123P-201ENST00000515911 60 ntBASIC3.78□□□□□ -1.8
VARSP26640 Y_RNA.714-201ENST00000517065 90 ntBASIC3.78□□□□□ -1.8
VARSP26640 YPEL5P3-201ENST00000547227 352 ntBASIC3.78□□□□□ -1.8
VARSP26640 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VARSP26640 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms