Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RFX1P22670 snoU2-30.2-201ENST00000362805 70 ntBASIC3.67□□□□□ -1.82
RFX1P22670 SNRPGP8-201ENST00000454064 226 ntBASIC3.67□□□□□ -1.82
RFX1P22670 FCF1P8-201ENST00000510322 597 ntBASIC3.67□□□□□ -1.82
RFX1P22670 RNA5SP272-201ENST00000516095 111 ntBASIC3.67□□□□□ -1.82
RFX1P22670 MIR2276-201ENST00000516886 89 ntBASIC3.67□□□□□ -1.82
RFX1P22670 AL929325.1-201ENST00000603096 117 ntBASIC3.67□□□□□ -1.82
RFX1P22670 AC073476.4-201ENST00000628409 72 ntBASIC3.67□□□□□ -1.82
RFX1P22670 MIR7153-201ENST00000637758 57 ntBASIC3.67□□□□□ -1.82
RFX1P22670 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
RFX1P22670 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.67□□□□□ -1.82
RFX1P22670 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.67□□□□□ -1.82
RFX1P22670 RNU6-1081P-201ENST00000384537 107 ntBASIC3.66□□□□□ -1.82
RFX1P22670 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RFX1P22670 Y_RNA.587-201ENST00000391210 103 ntBASIC3.66□□□□□ -1.82
RFX1P22670 MIR513C-201ENST00000401352 84 ntBASIC3.66□□□□□ -1.82
RFX1P22670 RNU6-257P-201ENST00000410238 98 ntBASIC3.66□□□□□ -1.82
RFX1P22670 HMGN2P34-201ENST00000437647 269 ntBASIC3.66□□□□□ -1.82
RFX1P22670 RPS4XP11-201ENST00000446897 772 ntBASIC3.66□□□□□ -1.82
RFX1P22670 AC245102.2-201ENST00000448956 180 ntBASIC3.66□□□□□ -1.82
RFX1P22670 RNU7-99P-201ENST00000516271 62 ntBASIC3.66□□□□□ -1.82
RFX1P22670 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RFX1P22670 AC007229.1-201ENST00000590455 412 ntBASIC3.66□□□□□ -1.82
RFX1P22670 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFX1P22670 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFX1P22670 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFX1P22670 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.65□□□□□ -1.82
RFX1P22670 MIR520G-201ENST00000385064 90 ntBASIC3.65□□□□□ -1.83
RFX1P22670 RN7SKP220-201ENST00000410611 288 ntBASIC3.65□□□□□ -1.83
RFX1P22670 Y_RNA.622-201ENST00000411091 108 ntBASIC3.65□□□□□ -1.83
RFX1P22670 RPL30P13-201ENST00000418873 348 ntBASIC3.65□□□□□ -1.83
RFX1P22670 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.65□□□□□ -1.83
RFX1P22670 AC092427.1-202ENST00000430569 476 ntBASIC3.65□□□□□ -1.83
RFX1P22670 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.65□□□□□ -1.83
RFX1P22670 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.65□□□□□ -1.83
RFX1P22670 RN7SL636P-201ENST00000497504 294 ntBASIC3.65□□□□□ -1.83
RFX1P22670 NDUFB9P3-201ENST00000521269 501 ntBASIC3.65□□□□□ -1.83
RFX1P22670 MIR5680-201ENST00000577577 84 ntBASIC3.65□□□□□ -1.83
RFX1P22670 MIR7112-201ENST00000616126 65 ntBASIC3.65□□□□□ -1.83
RFX1P22670 SNORA50A-202ENST00000629536 136 ntBASIC3.65□□□□□ -1.83
RFX1P22670 AC010332.2-201ENST00000613083 1904 ntBASIC3.65□□□□□ -1.83
RFX1P22670 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.65□□□□□ -1.83
RFX1P22670 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RFX1P22670 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFX1P22670 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.64□□□□□ -1.83
RFX1P22670 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.64□□□□□ -1.83
RFX1P22670 SNORD45.3-201ENST00000363836 72 ntBASIC3.64□□□□□ -1.83
RFX1P22670 Y_RNA.203-201ENST00000364106 102 ntBASIC3.64□□□□□ -1.83
RFX1P22670 Z96811.1-201ENST00000445880 108 ntBASIC3.64□□□□□ -1.83
RFX1P22670 HMGN1P18-201ENST00000457642 277 ntBASIC3.64□□□□□ -1.83
RFX1P22670 AL160236.1-201ENST00000556317 195 ntBASIC3.64□□□□□ -1.83
RFX1P22670 MIR3646-201ENST00000578301 84 ntBASIC3.64□□□□□ -1.83
RFX1P22670 MIR338-201ENST00000636369 67 ntBASIC3.64□□□□□ -1.83
RFX1P22670 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
RFX1P22670 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFX1P22670 RNU6-199P-201ENST00000362954 107 ntBASIC3.63□□□□□ -1.83
RFX1P22670 SNORD17-201ENST00000390930 237 ntBASIC3.63□□□□□ -1.83
RFX1P22670 AC244505.4-201ENST00000434905 287 ntBASIC3.63□□□□□ -1.83
RFX1P22670 SSXP5-201ENST00000443473 287 ntBASIC3.63□□□□□ -1.83
RFX1P22670 SNORA25.12-201ENST00000516202 82 ntBASIC3.63□□□□□ -1.83
RFX1P22670 YPEL5P2-201ENST00000605553 359 ntBASIC3.63□□□□□ -1.83
RFX1P22670 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.63□□□□□ -1.83
RFX1P22670 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RFX1P22670 ZNF702P-202ENST00000434269 1966 ntBASIC3.62□□□□□ -1.83
RFX1P22670 AC100821.1-201ENST00000523153 2479 ntBASIC3.62□□□□□ -1.83
RFX1P22670 RNA5SP374-201ENST00000362939 125 ntBASIC3.62□□□□□ -1.83
RFX1P22670 RNU6-160P-201ENST00000384591 107 ntBASIC3.62□□□□□ -1.83
RFX1P22670 RNU6-417P-201ENST00000384712 107 ntBASIC3.62□□□□□ -1.83
RFX1P22670 MIR515-2-201ENST00000384883 83 ntBASIC3.62□□□□□ -1.83
RFX1P22670 MIR515-1-201ENST00000384884 83 ntBASIC3.62□□□□□ -1.83
RFX1P22670 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.62□□□□□ -1.83
RFX1P22670 RPS15AP28-201ENST00000435088 386 ntBASIC3.62□□□□□ -1.83
RFX1P22670 AC018634.1-201ENST00000437554 401 ntBASIC3.62□□□□□ -1.83
RFX1P22670 RNA5SP341-201ENST00000516261 117 ntBASIC3.62□□□□□ -1.83
RFX1P22670 AC011604.1-201ENST00000545978 196 ntBASIC3.62□□□□□ -1.83
RFX1P22670 AC112693.2-201ENST00000556538 232 ntBASIC3.62□□□□□ -1.83
RFX1P22670 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.62□□□□□ -1.83
RFX1P22670 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.61□□□□□ -1.83
RFX1P22670 RNU6-22P-201ENST00000384355 107 ntBASIC3.61□□□□□ -1.83
RFX1P22670 Y_RNA.510-201ENST00000384511 114 ntBASIC3.61□□□□□ -1.83
RFX1P22670 Y_RNA.521-201ENST00000384560 114 ntBASIC3.61□□□□□ -1.83
RFX1P22670 RNU6-768P-201ENST00000384683 107 ntBASIC3.61□□□□□ -1.83
RFX1P22670 SNORA40-201ENST00000388090 126 ntBASIC3.61□□□□□ -1.83
RFX1P22670 SNORD37.2-201ENST00000391075 66 ntBASIC3.61□□□□□ -1.83
RFX1P22670 RPS27P1-201ENST00000450552 247 ntBASIC3.61□□□□□ -1.83
RFX1P22670 RN7SL504P-201ENST00000494496 287 ntBASIC3.61□□□□□ -1.83
RFX1P22670 EIF4BP1-201ENST00000554881 351 ntBASIC3.61□□□□□ -1.83
RFX1P22670 MIR4276-201ENST00000584832 70 ntBASIC3.61□□□□□ -1.83
RFX1P22670 AL031274.2-201ENST00000599419 203 ntBASIC3.61□□□□□ -1.83
RFX1P22670 AL359075.3-201ENST00000613288 217 ntBASIC3.61□□□□□ -1.83
RFX1P22670 MIR6844-201ENST00000637122 62 ntBASIC3.61□□□□□ -1.83
RFX1P22670 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.61□□□□□ -1.83
RFX1P22670 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RFX1P22670 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFX1P22670 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.6□□□□□ -1.83
RFX1P22670 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RFX1P22670 RNA5SP383-201ENST00000362934 120 ntBASIC3.6□□□□□ -1.83
RFX1P22670 SNORD114-6-201ENST00000364393 72 ntBASIC3.6□□□□□ -1.83
RFX1P22670 Y_RNA.393-201ENST00000383936 102 ntBASIC3.6□□□□□ -1.83
RFX1P22670 SNORA79-201ENST00000408376 140 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms