Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 RNU6-623P-201ENST00000363143 105 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 RNU6-424P-201ENST00000384367 105 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 MIR329-1-201ENST00000385028 80 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 U8.16-201ENST00000391279 133 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 MIR190B-201ENST00000401119 79 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 RNU6-1054P-201ENST00000411293 104 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 EIF1P2-201ENST00000428233 350 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 AC091021.1-201ENST00000468051 388 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 RNA5SP20-201ENST00000515976 84 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 RNU6-322P-201ENST00000516010 103 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 RNU4-49P-201ENST00000516080 140 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 AC125232.2-201ENST00000592457 143 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.12□□□□□ -2.23
HLA-DPA1P20036 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
HLA-DPA1P20036 AC073544.1-201ENST00000600110 1595 ntBASIC1.12□□□□□ -2.23
HLA-DPA1P20036 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HLA-DPA1P20036 RNU4-79P-201ENST00000362764 141 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 Y_RNA.453-201ENST00000384223 109 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 RNU6-376P-201ENST00000384731 106 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 AL451046.2-201ENST00000403074 277 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 ELOCP21-201ENST00000412558 336 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 RNU7-87P-201ENST00000459343 62 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 HMGN1P7-201ENST00000491722 313 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 Y_RNA.682-201ENST00000516457 100 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 RNU6-341P-201ENST00000516973 96 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.11□□□□□ -2.23
HLA-DPA1P20036 EIF1P4-201ENST00000572664 335 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
HLA-DPA1P20036 AL050343.2-201ENST00000607338 280 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.11□□□□□ -2.23
HLA-DPA1P20036 AC012676.2-201ENST00000619258 186 ntBASIC1.11□□□□□ -2.23
HLA-DPA1P20036 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
HLA-DPA1P20036 Y_RNA.364-201ENST00000365532 101 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 SNORD41-201ENST00000386967 70 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 RNU6-700P-201ENST00000391043 107 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 AC018865.2-201ENST00000423631 129 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.1□□□□□ -2.23
HLA-DPA1P20036 OR9P1P-201ENST00000496431 281 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 RNU7-12P-201ENST00000516030 62 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 RNU6-720P-201ENST00000516363 108 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DPA1P20036 MIR5701-3-201ENST00000578890 82 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 MIR5701-1-201ENST00000585138 82 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 MIR5701-2-201ENST00000615634 82 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 U4.5-201ENST00000617137 123 ntBASIC1.1□□□□□ -2.23
HLA-DPA1P20036 AC005592.1-201ENST00000566527 1640 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 Y_RNA.3-201ENST00000362331 103 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 SNORA27.1-201ENST00000362604 124 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 SNORA2.2-201ENST00000365473 135 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AC245047.7-201ENST00000440265 293 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AC093850.1-201ENST00000454121 251 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 MTND5P5-201ENST00000503764 376 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 UBL5P1-201ENST00000507979 193 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 RNU6-917P-201ENST00000516294 104 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AP002004.2-201ENST00000531656 154 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AC091178.2-201ENST00000584401 117 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AC080078.2-201ENST00000603766 501 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AC018462.2-201ENST00000605375 395 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AC080078.3-201ENST00000605407 463 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AL357075.2-201ENST00000614906 189 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 AC104260.1-201ENST00000616660 539 ntBASIC1.09□□□□□ -2.23
HLA-DPA1P20036 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HLA-DPA1P20036 Y_RNA.2-201ENST00000362330 96 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 SNORA1B-201ENST00000362535 133 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 RNU6-879P-201ENST00000364328 108 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 RNU6-1145P-201ENST00000384246 107 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 Y_RNA.473-201ENST00000384333 102 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 Y_RNA.498-201ENST00000384460 102 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DPA1P20036 UBE2V1P7-201ENST00000446395 340 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 COX6CP14-201ENST00000469580 174 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 RPS29P25-201ENST00000481709 171 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 AC074133.1-201ENST00000515696 183 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 RN7SKP49-201ENST00000516675 260 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 AL357312.1-201ENST00000603879 298 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 AC005014.2-201ENST00000607795 599 ntBASIC1.08□□□□□ -2.24
HLA-DPA1P20036 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 SNORD115-47-201ENST00000391226 86 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 RNA5SP482-201ENST00000391269 118 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 AC074085.1-201ENST00000413598 418 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DPA1P20036 PCNPP5-201ENST00000452246 481 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 RPL39P39-201ENST00000455840 151 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 AC022493.2-201ENST00000506122 481 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DPA1P20036 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DPA1P20036 AC026782.1-201ENST00000512952 449 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 RNU6-1278P-201ENST00000516130 107 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 AC018448.1-201ENST00000552843 316 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms