Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AL359547.2-201ENST00000615810 418 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AL450472.1-202ENST00000637286 180 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
COL6A3P12111 RNU4-15P-201ENST00000362613 141 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 RNA5SP48-201ENST00000363969 126 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 RNU6-934P-201ENST00000365154 107 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 RNU6-652P-201ENST00000365488 107 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 RNU6-116P-201ENST00000384042 109 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 MIR300-201ENST00000401138 83 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 RPS3AP3-201ENST00000411933 242 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.43□□□□□ -2.48
COL6A3P12111 AC010486.2-201ENST00000505572 483 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.43□□□□□ -2.48
COL6A3P12111 AC090572.1-201ENST00000519251 160 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AC008521.1-201ENST00000587471 187 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 DPPA3P3-201ENST00000603842 430 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AC006441.5-201ENST00000612680 209 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AL162376.1-201ENST00000624117 175 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AC027279.3-201ENST00000625055 122 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 RNU6-562P-201ENST00000362731 107 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 RNU4-36P-201ENST00000364294 144 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 RNU6-378P-201ENST00000384324 107 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 SNORA26.3-201ENST00000391119 136 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AC098592.1-201ENST00000419352 333 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AL365184.2-201ENST00000431139 435 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AC007547.1-201ENST00000462177 490 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.44□□□□□ -2.48
COL6A3P12111 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.44□□□□□ -2.48
COL6A3P12111 RNA5SP66-201ENST00000517178 101 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AC104458.1-201ENST00000608243 463 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AC005520.5-201ENST00000613926 164 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AC010205.1-201ENST00000616668 449 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AC010332.2-201ENST00000613083 1904 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 RNU6-987P-201ENST00000384759 104 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 RNU6-613P-201ENST00000410412 108 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AC090960.1-201ENST00000421072 306 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AC007283.2-201ENST00000424739 197 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-0.44□□□□□ -2.48
COL6A3P12111 RPL39P34-201ENST00000477141 156 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AC022447.4-201ENST00000504053 364 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 MTCO1P31-201ENST00000506355 492 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.44□□□□□ -2.48
COL6A3P12111 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.44□□□□□ -2.48
COL6A3P12111 AC063944.3-201ENST00000609969 533 ntBASIC-0.44□□□□□ -2.48
COL6A3P12111 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 MIR873-201ENST00000401120 77 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 AL590084.2-201ENST00000401481 382 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 MIR1298-201ENST00000408783 112 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 FCF1P9-201ENST00000412546 282 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.45□□□□□ -2.48
COL6A3P12111 RNU7-41P-201ENST00000515917 61 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 RNU6-881P-201ENST00000516813 102 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.45□□□□□ -2.48
COL6A3P12111 SNORA28-201ENST00000606769 126 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 MIR15A-201ENST00000607334 83 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 AC108747.1-201ENST00000609508 535 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 FRG1KP-201ENST00000623592 341 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 U4.7-201ENST00000638126 106 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.45□□□□□ -2.48
COL6A3P12111 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 MIR125B2-201ENST00000385128 89 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 MIR516B2-201ENST00000385190 85 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
COL6A3P12111 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.45□□□□□ -2.48
COL6A3P12111 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
COL6A3P12111 RNU7-102P-201ENST00000458948 62 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 ZNF321P-202ENST00000550843 495 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.45□□□□□ -2.48
COL6A3P12111 MIR4677-201ENST00000584153 80 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 MIR4639-201ENST00000584938 69 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 AC012467.1-201ENST00000607740 256 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 AL139418.1-201ENST00000613613 177 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 SNORD115-42-201ENST00000364273 82 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 MIR802-201ENST00000390235 94 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 AC016907.1-201ENST00000419483 435 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 AL355994.1-201ENST00000424379 260 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.45□□□□□ -2.48
COL6A3P12111 AC244670.1-201ENST00000436879 112 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.45□□□□□ -2.48
COL6A3P12111 RNA5SP484-201ENST00000458857 111 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 RNU7-185P-201ENST00000459215 60 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.45□□□□□ -2.48
COL6A3P12111 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.45□□□□□ -2.48
COL6A3P12111 AL359999.1-201ENST00000604513 294 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 uc_338.19-201ENST00000616808 99 ntBASIC-0.45□□□□□ -2.48
COL6A3P12111 RNU6-535P-201ENST00000384722 107 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 MIR501-201ENST00000390204 84 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 RNU6-440P-201ENST00000390882 105 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 BX276092.1-201ENST00000427368 251 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms