Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MRPL42P3-201ENST00000401492 326 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.55□□□□□ -2.32
COL4A2P08572 RAB28P5-201ENST00000427490 651 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 TOMM22P2-201ENST00000430735 237 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.55□□□□□ -2.32
COL4A2P08572 AC048334.1-201ENST00000477975 159 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AC010469.2-201ENST00000496412 480 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 RNU6-165P-201ENST00000517170 99 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 MTND1P5-201ENST00000517906 940 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.55□□□□□ -2.32
COL4A2P08572 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.55□□□□□ -2.32
COL4A2P08572 MIR3611-201ENST00000584484 83 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AC010525.2-201ENST00000590920 195 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AC022432.1-201ENST00000595739 310 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AC012676.2-201ENST00000619258 186 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 SNORD3E-202ENST00000627253 216 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 RNU6-1266P-201ENST00000362794 105 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 SNORA33-201ENST00000363664 130 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 Y_RNA.231-201ENST00000364358 102 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 Y_RNA.303-201ENST00000364998 94 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 RNU6-910P-201ENST00000390844 107 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 USMG5P1-201ENST00000425964 177 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 Z82188.1-201ENST00000436709 154 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 MTND4P18-201ENST00000447010 465 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 Y_RNA.693-201ENST00000516641 110 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.55□□□□□ -2.32
COL4A2P08572 UBL5P4-201ENST00000562584 236 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 MIR4438-201ENST00000585271 93 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AL021879.1-201ENST00000611756 288 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AC087588.2-201ENST00000617667 426 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AL513423.1-201ENST00000621695 132 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 AC006435.5-201ENST00000624486 112 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.55□□□□□ -2.32
COL4A2P08572 RNA5SP331-201ENST00000364986 107 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 RNU4-20P-201ENST00000365601 151 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 SNORD116-11-201ENST00000383882 92 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
COL4A2P08572 MTCYBP4-201ENST00000401524 249 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 RPL30P16-201ENST00000419341 429 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 AC005002.2-201ENST00000438228 269 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.54□□□□□ -2.32
COL4A2P08572 MTND1P1-201ENST00000445453 368 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 RPS27P22-201ENST00000478056 241 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.54□□□□□ -2.32
COL4A2P08572 AC090049.2-201ENST00000550377 109 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 FRG2DP-202ENST00000566967 323 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 PIGPP4-201ENST00000584447 307 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 SNORA28-201ENST00000606769 126 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 AC245008.1-201ENST00000608123 476 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 AC092954.2-201ENST00000609103 430 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 AC097520.1-201ENST00000624435 385 ntBASIC0.54□□□□□ -2.32
COL4A2P08572 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.54□□□□□ -2.32
COL4A2P08572 RNU6-199P-201ENST00000362954 107 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 Y_RNA.265-201ENST00000364677 108 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 Y_RNA.319-201ENST00000365138 92 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 RNU6-281P-201ENST00000384212 103 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 MIR562-201ENST00000384894 95 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.53□□□□□ -2.32
COL4A2P08572 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.53□□□□□ -2.32
COL4A2P08572 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.53□□□□□ -2.32
COL4A2P08572 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.53□□□□□ -2.32
COL4A2P08572 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.53□□□□□ -2.32
COL4A2P08572 AC079354.2-201ENST00000453523 154 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 AL049830.1-201ENST00000468034 425 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 TRBVA-201ENST00000498804 316 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 RNU7-12P-201ENST00000516030 62 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 AL590705.4-201ENST00000532209 134 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 MIR4661-201ENST00000582720 75 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
COL4A2P08572 AC124303.1-201ENST00000605703 360 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 AC010999.1-201ENST00000611856 324 ntBASIC0.53□□□□□ -2.32
COL4A2P08572 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.53□□□□□ -2.32
COL4A2P08572 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.32
COL4A2P08572 AP000568.1-201ENST00000282964 442 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 Y_RNA.412-201ENST00000384001 104 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
COL4A2P08572 AL355796.1-201ENST00000406706 323 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 RNA5SP475-201ENST00000410568 110 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AC016909.1-201ENST00000415916 166 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.52□□□□□ -2.33
COL4A2P08572 MTCO3P18-201ENST00000440206 761 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AC245047.7-201ENST00000440265 293 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 RPL39P39-201ENST00000455840 151 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.52□□□□□ -2.33
COL4A2P08572 AC019235.1-201ENST00000503847 207 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AC010598.1-201ENST00000510378 103 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 RNU6-322P-201ENST00000516010 103 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 SCARNA16.2-201ENST00000516520 172 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 RNU6-256P-201ENST00000516747 97 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 RNU7-28P-201ENST00000516759 62 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 RNU6-835P-201ENST00000516974 104 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AC027419.1-201ENST00000522976 328 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AC091178.2-201ENST00000584401 117 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AC023932.2-201ENST00000603176 175 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AL359880.1-201ENST00000621879 266 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AC068647.2-201ENST00000637380 353 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 AL391516.1-201ENST00000554380 2449 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 Y_RNA.38-201ENST00000362617 102 ntBASIC0.52□□□□□ -2.33
COL4A2P08572 Y_RNA.60-201ENST00000362831 98 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms