Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU6-324P-201ENST00000363957 106 ntBASIC2.51□□□□□ -2.01
RHOP08100 Y_RNA.304-201ENST00000365011 112 ntBASIC2.51□□□□□ -2.01
RHOP08100 RNU6-975P-201ENST00000384296 105 ntBASIC2.51□□□□□ -2.01
RHOP08100 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RHOP08100 RNU6-710P-201ENST00000410424 105 ntBASIC2.51□□□□□ -2.01
RHOP08100 AL161788.1-201ENST00000441805 169 ntBASIC2.51□□□□□ -2.01
RHOP08100 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.51□□□□□ -2.01
RHOP08100 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
RHOP08100 AP005660.1-201ENST00000522972 293 ntBASIC2.51□□□□□ -2.01
RHOP08100 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.51□□□□□ -2.01
RHOP08100 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RHOP08100 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RHOP08100 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
RHOP08100 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
RHOP08100 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RHOP08100 RNA5SP240-201ENST00000365355 128 ntBASIC2.5□□□□□ -2.01
RHOP08100 RNU6-1062P-201ENST00000383908 107 ntBASIC2.5□□□□□ -2.01
RHOP08100 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RHOP08100 AL603908.1-201ENST00000406098 201 ntBASIC2.5□□□□□ -2.01
RHOP08100 RNU7-57P-201ENST00000459540 60 ntBASIC2.5□□□□□ -2.01
RHOP08100 RNU6-221P-201ENST00000459541 99 ntBASIC2.5□□□□□ -2.01
RHOP08100 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.5□□□□□ -2.01
RHOP08100 AC024405.2-202ENST00000532731 184 ntBASIC2.5□□□□□ -2.01
RHOP08100 MIR1273D-201ENST00000577266 86 ntBASIC2.5□□□□□ -2.01
RHOP08100 AL008718.3-201ENST00000610217 321 ntBASIC2.5□□□□□ -2.01
RHOP08100 snoZ196.1-201ENST00000625269 89 ntBASIC2.5□□□□□ -2.01
RHOP08100 snoU18.1-201ENST00000629629 71 ntBASIC2.5□□□□□ -2.01
RHOP08100 AC016717.2-201ENST00000609089 5141 ntBASIC2.5□□□□□ -2.01
RHOP08100 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RHOP08100 SNORA38-201ENST00000363946 132 ntBASIC2.49□□□□□ -2.01
RHOP08100 RNU1-91P-201ENST00000364746 163 ntBASIC2.49□□□□□ -2.01
RHOP08100 RNU6-546P-201ENST00000383991 107 ntBASIC2.49□□□□□ -2.01
RHOP08100 RNU6-211P-201ENST00000384047 107 ntBASIC2.49□□□□□ -2.01
RHOP08100 Y_RNA.435-201ENST00000384095 112 ntBASIC2.49□□□□□ -2.01
RHOP08100 RNU6-886P-201ENST00000384319 105 ntBASIC2.49□□□□□ -2.01
RHOP08100 RNU6-220P-201ENST00000390919 107 ntBASIC2.49□□□□□ -2.01
RHOP08100 PCNPP3-201ENST00000393579 471 ntBASIC2.49□□□□□ -2.01
RHOP08100 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.49□□□□□ -2.01
RHOP08100 HMGN2P35-201ENST00000412164 270 ntBASIC2.49□□□□□ -2.01
RHOP08100 AL135790.2-201ENST00000437701 267 ntBASIC2.49□□□□□ -2.01
RHOP08100 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
RHOP08100 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.49□□□□□ -2.01
RHOP08100 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.49□□□□□ -2.01
RHOP08100 RN7SL297P-201ENST00000483161 293 ntBASIC2.49□□□□□ -2.01
RHOP08100 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.49□□□□□ -2.01
RHOP08100 SNORA70.12-201ENST00000516084 153 ntBASIC2.49□□□□□ -2.01
RHOP08100 RNU2-34P-201ENST00000516534 121 ntBASIC2.49□□□□□ -2.01
RHOP08100 AC136628.3-201ENST00000521868 290 ntBASIC2.49□□□□□ -2.01
RHOP08100 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.49□□□□□ -2.01
RHOP08100 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RHOP08100 AP002392.1-201ENST00000537692 208 ntBASIC2.49□□□□□ -2.01
RHOP08100 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.49□□□□□ -2.01
RHOP08100 MIR5692C2-201ENST00000577959 77 ntBASIC2.49□□□□□ -2.01
RHOP08100 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.49□□□□□ -2.01
RHOP08100 MIR1248-201ENST00000629190 106 ntBASIC2.49□□□□□ -2.01
RHOP08100 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RHOP08100 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RHOP08100 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RHOP08100 RNU6-1020P-201ENST00000363684 107 ntBASIC2.48□□□□□ -2.01
RHOP08100 Y_RNA.270-201ENST00000364693 104 ntBASIC2.48□□□□□ -2.01
RHOP08100 Y_RNA.368-201ENST00000365547 113 ntBASIC2.48□□□□□ -2.01
RHOP08100 AL357139.1-201ENST00000407792 426 ntBASIC2.48□□□□□ -2.01
RHOP08100 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.48□□□□□ -2.01
RHOP08100 RNU2-63P-201ENST00000410792 194 ntBASIC2.48□□□□□ -2.01
RHOP08100 RNU2-32P-201ENST00000411193 191 ntBASIC2.48□□□□□ -2.01
RHOP08100 AC003685.2-201ENST00000422795 395 ntBASIC2.48□□□□□ -2.01
RHOP08100 BTF3P11-201ENST00000426582 477 ntBASIC2.48□□□□□ -2.01
RHOP08100 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RHOP08100 AC104332.1-201ENST00000440471 797 ntBASIC2.48□□□□□ -2.01
RHOP08100 RNU7-26P-201ENST00000458980 63 ntBASIC2.48□□□□□ -2.01
RHOP08100 Y_RNA.637-201ENST00000459424 114 ntBASIC2.48□□□□□ -2.01
RHOP08100 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.48□□□□□ -2.01
RHOP08100 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RHOP08100 AC004486.1-201ENST00000546846 233 ntBASIC2.48□□□□□ -2.01
RHOP08100 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.48□□□□□ -2.01
RHOP08100 AC072026.1-201ENST00000605023 201 ntBASIC2.48□□□□□ -2.01
RHOP08100 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RHOP08100 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RHOP08100 RNU6-653P-201ENST00000363074 106 ntBASIC2.47□□□□□ -2.01
RHOP08100 RNU1-23P-201ENST00000363361 144 ntBASIC2.47□□□□□ -2.01
RHOP08100 Y_RNA.262-201ENST00000364641 102 ntBASIC2.47□□□□□ -2.01
RHOP08100 Y_RNA.456-201ENST00000384232 111 ntBASIC2.47□□□□□ -2.01
RHOP08100 RNU6-1235P-201ENST00000384559 107 ntBASIC2.47□□□□□ -2.01
RHOP08100 MIR873-201ENST00000401120 77 ntBASIC2.47□□□□□ -2.01
RHOP08100 RNU2-48P-201ENST00000410694 191 ntBASIC2.47□□□□□ -2.01
RHOP08100 RNU6-498P-201ENST00000459468 107 ntBASIC2.47□□□□□ -2.01
RHOP08100 RNU6-237P-201ENST00000515985 71 ntBASIC2.47□□□□□ -2.01
RHOP08100 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.47□□□□□ -2.01
RHOP08100 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.47□□□□□ -2.01
RHOP08100 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
RHOP08100 Y_RNA.150-201ENST00000363562 102 ntBASIC2.46□□□□□ -2.02
RHOP08100 RNU6-682P-201ENST00000363843 106 ntBASIC2.46□□□□□ -2.02
RHOP08100 RNU6-801P-201ENST00000364087 105 ntBASIC2.46□□□□□ -2.02
RHOP08100 RNU6-47P-201ENST00000383866 107 ntBASIC2.46□□□□□ -2.02
RHOP08100 RNU6-763P-201ENST00000390865 106 ntBASIC2.46□□□□□ -2.02
RHOP08100 RNU6-918P-201ENST00000391219 106 ntBASIC2.46□□□□□ -2.02
RHOP08100 RPL23AP7-203ENST00000449021 469 ntBASIC2.46□□□□□ -2.02
RHOP08100 HMGN2P18-201ENST00000450680 270 ntBASIC2.46□□□□□ -2.02
RHOP08100 AC107393.1-201ENST00000512403 346 ntBASIC2.46□□□□□ -2.02
RHOP08100 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms