Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MIR4438-201ENST00000585271 93 ntBASIC0.98□□□□□ -2.25
CAPN1P07384 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.98□□□□□ -2.25
CAPN1P07384 RMST_2.1-201ENST00000617263 136 ntBASIC0.98□□□□□ -2.25
CAPN1P07384 MIR373-201ENST00000362273 69 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 Y_RNA.157-201ENST00000363638 102 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 Y_RNA.301-201ENST00000364990 103 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 Y_RNA.318-201ENST00000365131 97 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RNU6-281P-201ENST00000384212 103 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 Y_RNA.516-201ENST00000384541 124 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 MIR562-201ENST00000384894 95 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RNU1-139P-201ENST00000391307 165 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 AC009161.1-201ENST00000417306 376 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 MRPS10P1-201ENST00000448483 130 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RPL39P39-201ENST00000455840 151 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RPS29P1-201ENST00000465274 159 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RPS23P4-201ENST00000487908 423 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 AC105313.1-201ENST00000509121 353 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RNU6-1114P-201ENST00000516022 107 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RNU6-947P-201ENST00000516264 106 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 Y_RNA.683-201ENST00000516508 93 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RNU6-113P-201ENST00000516653 101 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RNU6-922P-201ENST00000516753 99 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RNU1-54P-201ENST00000517181 120 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 CBX3P8-201ENST00000532412 525 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.97□□□□□ -2.25
CAPN1P07384 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 GHRLOS.1-201ENST00000610995 70 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 MIR6128-201ENST00000615528 109 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 AC027335.2-201ENST00000624030 375 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 AC006435.5-201ENST00000624486 112 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 MIR3662-201ENST00000637030 95 ntBASIC0.97□□□□□ -2.25
CAPN1P07384 RNU6-623P-201ENST00000363143 105 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 Y_RNA.106-201ENST00000363189 100 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 Y_RNA.265-201ENST00000364677 108 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 Y_RNA.473-201ENST00000384333 102 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 Y_RNA.490-201ENST00000384413 102 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 RNU6-505P-201ENST00000384427 107 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 RNA5SP118-201ENST00000410385 109 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 RNU6-1001P-201ENST00000411265 100 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 USP9YP16-201ENST00000430287 407 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 MTND4LP16-201ENST00000440828 295 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 USP9YP23-201ENST00000455085 407 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 SNORD5.1-201ENST00000458800 75 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 snoU13.18-201ENST00000459483 104 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 AC010469.2-201ENST00000496412 480 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 RNU4-49P-201ENST00000516080 140 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 SNORD116-28-201ENST00000516123 91 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 AC093023.1-201ENST00000547375 507 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.96□□□□□ -2.26
CAPN1P07384 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.96□□□□□ -2.26
CAPN1P07384 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 AC125232.2-201ENST00000592457 143 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 AC068790.6-201ENST00000602558 258 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 AC018630.2-201ENST00000534866 2403 ntBASIC0.96□□□□□ -2.26
CAPN1P07384 RNU6-199P-201ENST00000362954 107 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 RNU6-1013P-201ENST00000384180 107 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 MIR660-201ENST00000385235 97 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 SNORD115-47-201ENST00000391226 86 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CAPN1P07384 AL451046.2-201ENST00000403074 277 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 USMG5P1-201ENST00000425964 177 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 RAB28P5-201ENST00000427490 651 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 STAG3L5P-204ENST00000443759 179 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 AC105758.1-201ENST00000506038 399 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 SNORA31.2-201ENST00000516019 134 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 Y_RNA.706-201ENST00000516933 99 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 AL357312.1-201ENST00000603879 298 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 AC100812.1-201ENST00000607622 580 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 MIR3688-2-201ENST00000636963 87 ntBASIC0.95□□□□□ -2.26
CAPN1P07384 RNU6-910P-201ENST00000390844 107 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 AL355796.1-201ENST00000406706 323 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.94□□□□□ -2.26
CAPN1P07384 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.94□□□□□ -2.26
CAPN1P07384 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.94□□□□□ -2.26
CAPN1P07384 MTND5P5-201ENST00000503764 376 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 AC010598.1-201ENST00000510378 103 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.94□□□□□ -2.26
CAPN1P07384 AC011604.1-201ENST00000545978 196 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 MIR4778-201ENST00000577635 80 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 MIR4790-201ENST00000577799 79 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 AC005014.2-201ENST00000607795 599 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 AL357075.2-201ENST00000614906 189 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 AC090517.2-201ENST00000614966 680 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 U4.5-201ENST00000617137 123 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CAPN1P07384 MTND5P16-201ENST00000460269 1703 ntBASIC0.94□□□□□ -2.26
CAPN1P07384 SNORA20B-201ENST00000384220 132 ntBASIC0.93□□□□□ -2.26
CAPN1P07384 Y_RNA.453-201ENST00000384223 109 ntBASIC0.93□□□□□ -2.26
CAPN1P07384 Y_RNA.573-201ENST00000384763 105 ntBASIC0.93□□□□□ -2.26
CAPN1P07384 MIR329-1-201ENST00000385028 80 ntBASIC0.93□□□□□ -2.26
CAPN1P07384 AC018710.1-201ENST00000506509 158 ntBASIC0.93□□□□□ -2.26
CAPN1P07384 AC026782.1-201ENST00000512952 449 ntBASIC0.93□□□□□ -2.26
CAPN1P07384 AC097462.1-201ENST00000514125 324 ntBASIC0.93□□□□□ -2.26
CAPN1P07384 AC046134.1-201ENST00000514454 666 ntBASIC0.93□□□□□ -2.26
CAPN1P07384 RNA5SP220-201ENST00000516298 104 ntBASIC0.93□□□□□ -2.26
CAPN1P07384 RNU7-28P-201ENST00000516759 62 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms