Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 Y_RNA.301-201ENST00000364990 103 ntBASIC1.09□□□□□ -2.23
TGFAP01135 SNORD114-22-201ENST00000365423 72 ntBASIC1.09□□□□□ -2.23
TGFAP01135 RNY1P14-201ENST00000384426 108 ntBASIC1.09□□□□□ -2.23
TGFAP01135 MIR222-201ENST00000384992 110 ntBASIC1.09□□□□□ -2.23
TGFAP01135 MIR653-201ENST00000385279 96 ntBASIC1.09□□□□□ -2.23
TGFAP01135 RNU6-1148P-201ENST00000410992 104 ntBASIC1.09□□□□□ -2.23
TGFAP01135 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.09□□□□□ -2.23
TGFAP01135 EIF1P2-201ENST00000428233 350 ntBASIC1.09□□□□□ -2.23
TGFAP01135 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.09□□□□□ -2.23
TGFAP01135 RNU2-56P-201ENST00000516826 190 ntBASIC1.09□□□□□ -2.23
TGFAP01135 SNORA70.22-201ENST00000517160 124 ntBASIC1.09□□□□□ -2.23
TGFAP01135 AC027419.1-201ENST00000522976 328 ntBASIC1.09□□□□□ -2.23
TGFAP01135 CBX3P8-201ENST00000532412 525 ntBASIC1.09□□□□□ -2.23
TGFAP01135 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.09□□□□□ -2.23
TGFAP01135 AC106754.2-201ENST00000623006 233 ntBASIC1.09□□□□□ -2.23
TGFAP01135 AL133216.2-202ENST00000634512 349 ntBASIC1.09□□□□□ -2.23
TGFAP01135 RNU6-222P-201ENST00000362438 107 ntBASIC1.08□□□□□ -2.24
TGFAP01135 Y_RNA.265-201ENST00000364677 108 ntBASIC1.08□□□□□ -2.24
TGFAP01135 Y_RNA.364-201ENST00000365532 101 ntBASIC1.08□□□□□ -2.24
TGFAP01135 SNORA20B-201ENST00000384220 132 ntBASIC1.08□□□□□ -2.24
TGFAP01135 Y_RNA.453-201ENST00000384223 109 ntBASIC1.08□□□□□ -2.24
TGFAP01135 RNU6-424P-201ENST00000384367 105 ntBASIC1.08□□□□□ -2.24
TGFAP01135 RNU6-700P-201ENST00000391043 107 ntBASIC1.08□□□□□ -2.24
TGFAP01135 MIR190B-201ENST00000401119 79 ntBASIC1.08□□□□□ -2.24
TGFAP01135 RNU6-1001P-201ENST00000411265 100 ntBASIC1.08□□□□□ -2.24
TGFAP01135 RNU6-1054P-201ENST00000411293 104 ntBASIC1.08□□□□□ -2.24
TGFAP01135 AC016907.1-201ENST00000419483 435 ntBASIC1.08□□□□□ -2.24
TGFAP01135 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.08□□□□□ -2.24
TGFAP01135 SUMO1P2-201ENST00000452524 304 ntBASIC1.08□□□□□ -2.24
TGFAP01135 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
TGFAP01135 AC105758.1-201ENST00000506038 399 ntBASIC1.08□□□□□ -2.24
TGFAP01135 RNU6-922P-201ENST00000516753 99 ntBASIC1.08□□□□□ -2.24
TGFAP01135 RNU6-341P-201ENST00000516973 96 ntBASIC1.08□□□□□ -2.24
TGFAP01135 AP002004.2-201ENST00000531656 154 ntBASIC1.08□□□□□ -2.24
TGFAP01135 AC011604.1-201ENST00000545978 196 ntBASIC1.08□□□□□ -2.24
TGFAP01135 AC090049.2-201ENST00000550377 109 ntBASIC1.08□□□□□ -2.24
TGFAP01135 AC125232.2-201ENST00000592457 143 ntBASIC1.08□□□□□ -2.24
TGFAP01135 AL357312.1-201ENST00000603879 298 ntBASIC1.08□□□□□ -2.24
TGFAP01135 MIR7974-201ENST00000615835 79 ntBASIC1.08□□□□□ -2.24
TGFAP01135 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TGFAP01135 MTND5P16-201ENST00000460269 1703 ntBASIC1.08□□□□□ -2.24
TGFAP01135 MIR329-1-201ENST00000385028 80 ntBASIC1.07□□□□□ -2.24
TGFAP01135 SNORD12-201ENST00000391002 90 ntBASIC1.07□□□□□ -2.24
TGFAP01135 SNORA40.6-201ENST00000391153 128 ntBASIC1.07□□□□□ -2.24
TGFAP01135 AL451046.2-201ENST00000403074 277 ntBASIC1.07□□□□□ -2.24
TGFAP01135 RNU6-1278P-201ENST00000516130 107 ntBASIC1.07□□□□□ -2.24
TGFAP01135 RNA5SP168-201ENST00000516642 112 ntBASIC1.07□□□□□ -2.24
TGFAP01135 RNU6-1016P-201ENST00000516689 94 ntBASIC1.07□□□□□ -2.24
TGFAP01135 AC018462.2-201ENST00000605375 395 ntBASIC1.07□□□□□ -2.24
TGFAP01135 AC104260.1-201ENST00000616660 539 ntBASIC1.07□□□□□ -2.24
TGFAP01135 MIR3688-2-201ENST00000636963 87 ntBASIC1.07□□□□□ -2.24
TGFAP01135 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TGFAP01135 AC073544.1-201ENST00000600110 1595 ntBASIC1.07□□□□□ -2.24
TGFAP01135 AL391516.1-201ENST00000554380 2449 ntBASIC1.06□□□□□ -2.24
TGFAP01135 MIR410-201ENST00000362222 80 ntBASIC1.06□□□□□ -2.24
TGFAP01135 SNORA27.1-201ENST00000362604 124 ntBASIC1.06□□□□□ -2.24
TGFAP01135 SNORA2.2-201ENST00000365473 135 ntBASIC1.06□□□□□ -2.24
TGFAP01135 MIR320A-201ENST00000385302 82 ntBASIC1.06□□□□□ -2.24
TGFAP01135 RNU6-510P-201ENST00000391239 108 ntBASIC1.06□□□□□ -2.24
TGFAP01135 RNA5SP482-201ENST00000391269 118 ntBASIC1.06□□□□□ -2.24
TGFAP01135 AL355796.1-201ENST00000406706 323 ntBASIC1.06□□□□□ -2.24
TGFAP01135 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.06□□□□□ -2.24
TGFAP01135 MTCYBP10-201ENST00000424905 650 ntBASIC1.06□□□□□ -2.24
TGFAP01135 COX6CP14-201ENST00000469580 174 ntBASIC1.06□□□□□ -2.24
TGFAP01135 MTND5P5-201ENST00000503764 376 ntBASIC1.06□□□□□ -2.24
TGFAP01135 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.06□□□□□ -2.24
TGFAP01135 SNORA31.2-201ENST00000516019 134 ntBASIC1.06□□□□□ -2.24
TGFAP01135 RNU4-49P-201ENST00000516080 140 ntBASIC1.06□□□□□ -2.24
TGFAP01135 AC105029.1-201ENST00000520250 669 ntBASIC1.06□□□□□ -2.24
TGFAP01135 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.06□□□□□ -2.24
TGFAP01135 MIR4778-201ENST00000577635 80 ntBASIC1.06□□□□□ -2.24
TGFAP01135 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.06□□□□□ -2.24
TGFAP01135 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.06□□□□□ -2.24
TGFAP01135 Y_RNA.3-201ENST00000362331 103 ntBASIC1.05□□□□□ -2.24
TGFAP01135 RNU4-79P-201ENST00000362764 141 ntBASIC1.05□□□□□ -2.24
TGFAP01135 RNU6-1145P-201ENST00000384246 107 ntBASIC1.05□□□□□ -2.24
TGFAP01135 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
TGFAP01135 ELOCP21-201ENST00000412558 336 ntBASIC1.05□□□□□ -2.24
TGFAP01135 AC074085.1-201ENST00000413598 418 ntBASIC1.05□□□□□ -2.24
TGFAP01135 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.05□□□□□ -2.24
TGFAP01135 AC018865.2-201ENST00000423631 129 ntBASIC1.05□□□□□ -2.24
TGFAP01135 DYNLT3P2-201ENST00000442517 295 ntBASIC1.05□□□□□ -2.24
TGFAP01135 AC004223.1-201ENST00000479840 271 ntBASIC1.05□□□□□ -2.24
TGFAP01135 OR9P1P-201ENST00000496431 281 ntBASIC1.05□□□□□ -2.24
TGFAP01135 AC018710.1-201ENST00000506509 158 ntBASIC1.05□□□□□ -2.24
TGFAP01135 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.05□□□□□ -2.24
TGFAP01135 RNA5SP20-201ENST00000515976 84 ntBASIC1.05□□□□□ -2.24
TGFAP01135 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.05□□□□□ -2.24
TGFAP01135 AL358944.1-201ENST00000528537 144 ntBASIC1.05□□□□□ -2.24
TGFAP01135 AC091178.2-201ENST00000584401 117 ntBASIC1.05□□□□□ -2.24
TGFAP01135 MIR3660-201ENST00000584845 100 ntBASIC1.05□□□□□ -2.24
TGFAP01135 RNU6-407P-201ENST00000365280 104 ntBASIC1.04□□□□□ -2.24
TGFAP01135 Y_RNA.466-201ENST00000384294 113 ntBASIC1.04□□□□□ -2.24
TGFAP01135 RNU6-376P-201ENST00000384731 106 ntBASIC1.04□□□□□ -2.24
TGFAP01135 HSPE1P13-201ENST00000451143 297 ntBASIC1.04□□□□□ -2.24
TGFAP01135 RPL39P39-201ENST00000455840 151 ntBASIC1.04□□□□□ -2.24
TGFAP01135 RNU6-329P-201ENST00000459618 107 ntBASIC1.04□□□□□ -2.24
TGFAP01135 AC091021.1-201ENST00000468051 388 ntBASIC1.04□□□□□ -2.24
TGFAP01135 RNA5SP61-201ENST00000516453 100 ntBASIC1.04□□□□□ -2.24
TGFAP01135 Y_RNA.682-201ENST00000516457 100 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms