Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MIR6715A-201ENST00000615929 79 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 snoZ196.1-201ENST00000625269 89 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CLPTM1O96005 MIR410-201ENST00000362222 80 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 Y_RNA.99-201ENST00000363138 105 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 Y_RNA.149-201ENST00000363558 117 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 Y_RNA.176-201ENST00000363815 109 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 Y_RNA.286-201ENST00000364813 102 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 RNU6-574P-201ENST00000384265 107 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 RNU6-713P-201ENST00000384761 107 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 MIR215-201ENST00000384858 110 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 SNORD115-46-201ENST00000390982 71 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CLPTM1O96005 HMGN2P39-201ENST00000398005 273 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 RNA5SP475-201ENST00000410568 110 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 RN7SKP192-201ENST00000411291 327 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 AL731563.1-201ENST00000442202 214 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 AC074290.1-201ENST00000448883 135 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.82□□□□□ -2.12
CLPTM1O96005 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.82□□□□□ -2.12
CLPTM1O96005 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.82□□□□□ -2.12
CLPTM1O96005 PRR13P7-201ENST00000605538 430 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 AC011373.1-201ENST00000607270 237 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.82□□□□□ -2.12
CLPTM1O96005 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 AC006001.4-201ENST00000622243 395 ntBASIC1.82□□□□□ -2.12
CLPTM1O96005 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CLPTM1O96005 SNORD113-8-201ENST00000363497 74 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 RNU6-1235P-201ENST00000384559 107 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 AC016909.1-201ENST00000415916 166 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 BX510359.4-201ENST00000423750 193 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 MTCYBP9-201ENST00000431021 303 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.81□□□□□ -2.12
CLPTM1O96005 RNU6-498P-201ENST00000459468 107 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 RNU6-221P-201ENST00000459541 99 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 AC025465.3-201ENST00000510570 311 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 MTCO2P24-201ENST00000515611 426 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 RNU6-155P-201ENST00000516347 100 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 RNU6-948P-201ENST00000516374 107 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 RNU6-570P-201ENST00000517051 105 ntBASIC1.81□□□□□ -2.12
CLPTM1O96005 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLPTM1O96005 snoU2_19.2-201ENST00000363024 80 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 Y_RNA.230-201ENST00000364348 109 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 RNU6-1164P-201ENST00000364428 107 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 Y_RNA.331-201ENST00000365267 102 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 Y_RNA.446-201ENST00000384178 104 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 SNORD63-201ENST00000384262 68 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 Y_RNA.462-201ENST00000384268 102 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 RNU6-160P-201ENST00000384591 107 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 RNU6-21P-201ENST00000384710 107 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 RNU6-1199P-201ENST00000411249 104 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 AL357134.1-201ENST00000445848 426 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 RNU6-856P-201ENST00000516959 98 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.8□□□□□ -2.12
CLPTM1O96005 AC027419.1-201ENST00000522976 328 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 AC022441.3-201ENST00000605737 136 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 AL773524.1-201ENST00000614065 229 ntBASIC1.8□□□□□ -2.12
CLPTM1O96005 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.8□□□□□ -2.12
CLPTM1O96005 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.8□□□□□ -2.12
CLPTM1O96005 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLPTM1O96005 Y_RNA.396-201ENST00000383949 103 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 Y_RNA.461-201ENST00000384263 103 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 RNU2-54P-201ENST00000410299 190 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 RNU5A-5P-201ENST00000411054 116 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 RNU6-1143P-201ENST00000516125 104 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 RNU2-34P-201ENST00000516534 121 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 RNU2-12P-201ENST00000517216 168 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 AC025647.1-201ENST00000517879 253 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 AC087441.2-201ENST00000529141 262 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.79□□□□□ -2.12
CLPTM1O96005 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.79□□□□□ -2.12
CLPTM1O96005 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.79□□□□□ -2.12
CLPTM1O96005 MIR219B-201ENST00000637023 88 ntBASIC1.79□□□□□ -2.12
CLPTM1O96005 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CLPTM1O96005 AL159152.1-201ENST00000635019 2587 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 SNORD81.1-201ENST00000363064 77 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 RNU6-23P-201ENST00000363283 107 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 Y_RNA.144-201ENST00000363521 113 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 RNA5SP493-201ENST00000364115 91 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 RNU6-1310P-201ENST00000384153 107 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 Y_RNA.483-201ENST00000384380 101 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 Y_RNA.541-201ENST00000384640 113 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 MIR597-201ENST00000384968 97 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 SNORA40.19-201ENST00000390846 128 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 Y_RNA.581-201ENST00000391017 97 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 MIR1261-201ENST00000408659 82 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 RNA5SP450-201ENST00000411206 102 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 AC244636.1-201ENST00000421152 228 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 AC060773.1-201ENST00000421698 310 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 AC245102.2-201ENST00000448956 180 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 AC005042.3-201ENST00000453230 174 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 HSPE1P25-201ENST00000455484 251 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 RNU6-496P-201ENST00000516145 99 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 AP005660.1-201ENST00000522972 293 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 Y_RNA.783-201ENST00000613546 102 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 MIR8062-201ENST00000621515 85 ntBASIC1.78□□□□□ -2.12
CLPTM1O96005 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CLPTM1O96005 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms