Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 RNA5SP72-201ENST00000364442 117 ntBASIC2.56□□□□□ -2
SCAF4O95104 RNU6-117P-201ENST00000365415 107 ntBASIC2.56□□□□□ -2
SCAF4O95104 RNU6-1323P-201ENST00000384025 107 ntBASIC2.56□□□□□ -2
SCAF4O95104 MIR518C-201ENST00000384822 101 ntBASIC2.56□□□□□ -2
SCAF4O95104 MIR183-201ENST00000384958 110 ntBASIC2.56□□□□□ -2
SCAF4O95104 MIR95-201ENST00000385072 81 ntBASIC2.56□□□□□ -2
SCAF4O95104 RNU6-257P-201ENST00000410238 98 ntBASIC2.56□□□□□ -2
SCAF4O95104 AC007064.1-201ENST00000412238 351 ntBASIC2.56□□□□□ -2
SCAF4O95104 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.56□□□□□ -2
SCAF4O95104 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.56□□□□□ -2
SCAF4O95104 AC074290.1-201ENST00000448883 135 ntBASIC2.56□□□□□ -2
SCAF4O95104 HMGN2P18-201ENST00000450680 270 ntBASIC2.56□□□□□ -2
SCAF4O95104 AL137159.1-201ENST00000452808 512 ntBASIC2.56□□□□□ -2
SCAF4O95104 AP004217.1-201ENST00000480579 346 ntBASIC2.56□□□□□ -2
SCAF4O95104 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.56□□□□□ -2
SCAF4O95104 AC107027.2-201ENST00000512197 115 ntBASIC2.56□□□□□ -2
SCAF4O95104 RNA5SP20-201ENST00000515976 84 ntBASIC2.56□□□□□ -2
SCAF4O95104 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
SCAF4O95104 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.56□□□□□ -2
SCAF4O95104 AC027419.1-201ENST00000522976 328 ntBASIC2.56□□□□□ -2
SCAF4O95104 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.56□□□□□ -2
SCAF4O95104 AC127455.1-201ENST00000565496 145 ntBASIC2.56□□□□□ -2
SCAF4O95104 MIR4276-201ENST00000584832 70 ntBASIC2.56□□□□□ -2
SCAF4O95104 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCAF4O95104 AL365361.1-201ENST00000566942 3481 ntBASIC2.56□□□□□ -2
SCAF4O95104 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SCAF4O95104 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCAF4O95104 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SCAF4O95104 RNU6-271P-201ENST00000363858 105 ntBASIC2.55□□□□□ -2
SCAF4O95104 RNU6-407P-201ENST00000365280 104 ntBASIC2.55□□□□□ -2
SCAF4O95104 RNU6-1117P-201ENST00000384525 104 ntBASIC2.55□□□□□ -2
SCAF4O95104 RNU6-1235P-201ENST00000384559 107 ntBASIC2.55□□□□□ -2
SCAF4O95104 RNU6-1072P-201ENST00000384703 107 ntBASIC2.55□□□□□ -2
SCAF4O95104 RNU6-443P-201ENST00000384780 107 ntBASIC2.55□□□□□ -2
SCAF4O95104 AL606845.1-201ENST00000404881 255 ntBASIC2.55□□□□□ -2
SCAF4O95104 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.55□□□□□ -2
SCAF4O95104 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.55□□□□□ -2
SCAF4O95104 RNU6-498P-201ENST00000459468 107 ntBASIC2.55□□□□□ -2
SCAF4O95104 AC010531.2-201ENST00000465012 153 ntBASIC2.55□□□□□ -2
SCAF4O95104 AC010409.1-201ENST00000487382 476 ntBASIC2.55□□□□□ -2
SCAF4O95104 RNU6-948P-201ENST00000516374 107 ntBASIC2.55□□□□□ -2
SCAF4O95104 RNU6-63P-201ENST00000516690 95 ntBASIC2.55□□□□□ -2
SCAF4O95104 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.55□□□□□ -2
SCAF4O95104 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.55□□□□□ -2
SCAF4O95104 MIR548X2-201ENST00000579776 100 ntBASIC2.55□□□□□ -2
SCAF4O95104 MIR548AI-201ENST00000579940 88 ntBASIC2.55□□□□□ -2
SCAF4O95104 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
SCAF4O95104 MIR5195-201ENST00000583555 115 ntBASIC2.55□□□□□ -2
SCAF4O95104 DNAJC19P2-201ENST00000593340 302 ntBASIC2.55□□□□□ -2
SCAF4O95104 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.55□□□□□ -2
SCAF4O95104 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.55□□□□□ -2
SCAF4O95104 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.55□□□□□ -2
SCAF4O95104 MIR6733-201ENST00000635723 61 ntBASIC2.55□□□□□ -2
SCAF4O95104 MIR367-201ENST00000362299 68 ntBASIC2.54□□□□□ -2
SCAF4O95104 RNU1-70P-201ENST00000362618 164 ntBASIC2.54□□□□□ -2
SCAF4O95104 RNU1-23P-201ENST00000363361 144 ntBASIC2.54□□□□□ -2
SCAF4O95104 RNU4-11P-201ENST00000365287 132 ntBASIC2.54□□□□□ -2
SCAF4O95104 RNU6-22P-201ENST00000384355 107 ntBASIC2.54□□□□□ -2
SCAF4O95104 RNU6-1228P-201ENST00000391014 107 ntBASIC2.54□□□□□ -2
SCAF4O95104 RNU2-48P-201ENST00000410694 191 ntBASIC2.54□□□□□ -2
SCAF4O95104 AL135786.1-201ENST00000415892 214 ntBASIC2.54□□□□□ -2
SCAF4O95104 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.54□□□□□ -2
SCAF4O95104 MTCO1P44-201ENST00000441935 243 ntBASIC2.54□□□□□ -2
SCAF4O95104 EEF1B2P7-201ENST00000451177 676 ntBASIC2.54□□□□□ -2
SCAF4O95104 AC080013.2-201ENST00000460866 323 ntBASIC2.54□□□□□ -2
SCAF4O95104 RN7SL633P-201ENST00000488974 297 ntBASIC2.54□□□□□ -2
SCAF4O95104 AC023141.11-201ENST00000508864 202 ntBASIC2.54□□□□□ -2
SCAF4O95104 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.54□□□□□ -2
SCAF4O95104 RNA5SP76-201ENST00000516277 87 ntBASIC2.54□□□□□ -2
SCAF4O95104 POLR3GP1-201ENST00000594073 261 ntBASIC2.54□□□□□ -2
SCAF4O95104 AC005972.2-201ENST00000604690 348 ntBASIC2.54□□□□□ -2
SCAF4O95104 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.54□□□□□ -2
SCAF4O95104 uc_338.25-201ENST00000613756 156 ntBASIC2.54□□□□□ -2
SCAF4O95104 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCAF4O95104 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.54□□□□□ -2
SCAF4O95104 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.53□□□□□ -2
SCAF4O95104 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SCAF4O95104 MIR340-201ENST00000362125 95 ntBASIC2.53□□□□□ -2
SCAF4O95104 SNORA38-201ENST00000363946 132 ntBASIC2.53□□□□□ -2
SCAF4O95104 RNU6-643P-201ENST00000384018 107 ntBASIC2.53□□□□□ -2
SCAF4O95104 RNU6-1081P-201ENST00000384537 107 ntBASIC2.53□□□□□ -2
SCAF4O95104 RNVU1-14-201ENST00000384770 164 ntBASIC2.53□□□□□ -2
SCAF4O95104 MIR15B-201ENST00000385045 98 ntBASIC2.53□□□□□ -2
SCAF4O95104 RNA5SP511-201ENST00000410487 115 ntBASIC2.53□□□□□ -2
SCAF4O95104 RNU2-32P-201ENST00000411193 191 ntBASIC2.53□□□□□ -2
SCAF4O95104 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.53□□□□□ -2
SCAF4O95104 AL121914.1-201ENST00000450188 156 ntBASIC2.53□□□□□ -2
SCAF4O95104 RNA5SP367-201ENST00000516557 118 ntBASIC2.53□□□□□ -2
SCAF4O95104 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.53□□□□□ -2
SCAF4O95104 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.53□□□□□ -2
SCAF4O95104 AC015720.1-201ENST00000565251 277 ntBASIC2.53□□□□□ -2
SCAF4O95104 AC005000.2-201ENST00000605468 310 ntBASIC2.53□□□□□ -2
SCAF4O95104 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.53□□□□□ -2
SCAF4O95104 AC013412.1-201ENST00000610687 192 ntBASIC2.53□□□□□ -2
SCAF4O95104 MIR7975-201ENST00000619350 68 ntBASIC2.53□□□□□ -2
SCAF4O95104 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
SCAF4O95104 AC006435.5-201ENST00000624486 112 ntBASIC2.53□□□□□ -2
SCAF4O95104 AC091895.1-201ENST00000624494 256 ntBASIC2.53□□□□□ -2
SCAF4O95104 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
SCAF4O95104 AC100821.1-201ENST00000523153 2479 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms