Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL022345.2-201ENST00000606307 135 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 AC069200.1-201ENST00000609511 323 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 AC009831.4-201ENST00000620744 325 ntBASIC2.98□□□□□ -1.93
TRIM13O60858 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM13O60858 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM13O60858 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TRIM13O60858 AC073325.2-201ENST00000339545 159 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 Y_RNA.52-201ENST00000362760 96 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 Y_RNA.85-201ENST00000363014 111 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 Y_RNA.91-201ENST00000363042 107 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 Y_RNA.163-201ENST00000363702 113 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 RNA5SP479-201ENST00000364858 117 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 MIR554-201ENST00000384874 96 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 SNORD67-201ENST00000390833 111 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.97□□□□□ -1.93
TRIM13O60858 RPS3P1-201ENST00000456781 192 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 AC008155.2-201ENST00000464337 397 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 RPS26P55-201ENST00000471178 356 ntBASIC2.97□□□□□ -1.93
TRIM13O60858 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.97□□□□□ -1.93
TRIM13O60858 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM13O60858 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM13O60858 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM13O60858 AC069528.2-201ENST00000624849 1991 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
TRIM13O60858 SNORA27.1-201ENST00000362604 124 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 RNU6-1305P-201ENST00000364353 104 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 Y_RNA.634-201ENST00000364811 113 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 MIR891A-201ENST00000401237 79 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 AL031121.1-201ENST00000406553 254 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 RNU2-70P-201ENST00000410718 179 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM13O60858 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM13O60858 RN7SL863P-201ENST00000462370 296 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 SNORD77.4-201ENST00000516158 81 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 RNU1-104P-201ENST00000517280 175 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 AC007012.1-201ENST00000567192 175 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM13O60858 AC007318.2-201ENST00000620999 243 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 AL596211.1-201ENST00000569873 2277 ntBASIC2.96□□□□□ -1.94
TRIM13O60858 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM13O60858 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM13O60858 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM13O60858 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM13O60858 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM13O60858 RNA5SP139-201ENST00000364340 117 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 SNORA51.10-201ENST00000384418 136 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 SNORD12C-201ENST00000386307 89 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 AL139095.1-201ENST00000404326 391 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 CYCSP35-201ENST00000451978 304 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM13O60858 RNA5SP385-201ENST00000515947 110 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.95□□□□□ -1.94
TRIM13O60858 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM13O60858 UBL5P2-201ENST00000583788 219 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 AC062037.1-201ENST00000605302 128 ntBASIC2.95□□□□□ -1.94
TRIM13O60858 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM13O60858 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM13O60858 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM13O60858 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM13O60858 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM13O60858 MAPK10-322ENST00000641485 4530 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM13O60858 AC103988.1-201ENST00000566382 2177 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 AL356292.1-201ENST00000283110 373 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 RNU6-271P-201ENST00000363858 105 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 RNA5SP125-201ENST00000364843 120 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 SNORA51.5-201ENST00000384126 131 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 MIR624-201ENST00000385217 97 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 MIR1263-201ENST00000408324 86 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 RNU4-47P-201ENST00000410876 114 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 AL021397.1-201ENST00000451806 248 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 RN7SL542P-201ENST00000467147 294 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TRIM13O60858 HMGN2P9-201ENST00000476875 229 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 RPL36AP48-201ENST00000485521 314 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 AC079598.5-201ENST00000547460 117 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 AC006130.2-201ENST00000586202 326 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM13O60858 uc_338.4-201ENST00000616635 176 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM13O60858 AL035425.3-201ENST00000564206 4996 ntBASIC2.94□□□□□ -1.94
TRIM13O60858 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM13O60858 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM13O60858 Y_RNA.528-201ENST00000384575 108 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 Y_RNA.549-201ENST00000384657 102 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 MIR570-201ENST00000384917 97 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 MIR181B1-201ENST00000385240 110 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 MIR1302-5-201ENST00000408164 150 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 RNA5SP127-201ENST00000411051 133 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 EDDM3CP-201ENST00000415977 425 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 RPS29P6-201ENST00000438196 145 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 MTATP6P21-201ENST00000440681 189 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 AC112771.1-201ENST00000463581 102 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 RN7SL293P-201ENST00000481765 281 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 SNORA40.13-201ENST00000516379 120 ntBASIC2.93□□□□□ -1.94
TRIM13O60858 HSPE1P18-201ENST00000517602 280 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms