Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 U2.11-201ENST00000616345 191 ntBASIC2.59□□□□□ -1.99
PRAMEF4O60810 U2.2-201ENST00000616535 191 ntBASIC2.59□□□□□ -1.99
PRAMEF4O60810 U2.3-201ENST00000617785 191 ntBASIC2.59□□□□□ -1.99
PRAMEF4O60810 U2.19-201ENST00000618602 191 ntBASIC2.59□□□□□ -1.99
PRAMEF4O60810 RNU2-1-201ENST00000618664 191 ntBASIC2.59□□□□□ -1.99
PRAMEF4O60810 U2.6-201ENST00000619225 191 ntBASIC2.59□□□□□ -1.99
PRAMEF4O60810 U2.5-201ENST00000619465 191 ntBASIC2.59□□□□□ -1.99
PRAMEF4O60810 U2.10-201ENST00000620268 191 ntBASIC2.59□□□□□ -1.99
PRAMEF4O60810 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.59□□□□□ -1.99
PRAMEF4O60810 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PRAMEF4O60810 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
PRAMEF4O60810 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PRAMEF4O60810 RNU4-17P-201ENST00000365598 141 ntBASIC2.58□□□□□ -2
PRAMEF4O60810 MIR1262-201ENST00000408276 93 ntBASIC2.58□□□□□ -2
PRAMEF4O60810 AC060773.1-201ENST00000421698 310 ntBASIC2.58□□□□□ -2
PRAMEF4O60810 RPL36AP21-201ENST00000490372 323 ntBASIC2.58□□□□□ -2
PRAMEF4O60810 AC074198.2-201ENST00000508153 258 ntBASIC2.58□□□□□ -2
PRAMEF4O60810 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.58□□□□□ -2
PRAMEF4O60810 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.58□□□□□ -2
PRAMEF4O60810 SNORA4.4-201ENST00000515921 135 ntBASIC2.58□□□□□ -2
PRAMEF4O60810 RNA5SP367-201ENST00000516557 118 ntBASIC2.58□□□□□ -2
PRAMEF4O60810 CENPCP1-201ENST00000533085 2578 ntBASIC2.57□□□□□ -2
PRAMEF4O60810 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRAMEF4O60810 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PRAMEF4O60810 Y_RNA.99-201ENST00000363138 105 ntBASIC2.57□□□□□ -2
PRAMEF4O60810 Y_RNA.240-201ENST00000364469 95 ntBASIC2.57□□□□□ -2
PRAMEF4O60810 RPL39P40-201ENST00000445481 146 ntBASIC2.57□□□□□ -2
PRAMEF4O60810 AC010409.1-201ENST00000487382 476 ntBASIC2.57□□□□□ -2
PRAMEF4O60810 AL365434.2-201ENST00000607979 234 ntBASIC2.57□□□□□ -2
PRAMEF4O60810 MIR548AY-201ENST00000617669 107 ntBASIC2.57□□□□□ -2
PRAMEF4O60810 AC068647.2-201ENST00000637380 353 ntBASIC2.57□□□□□ -2
PRAMEF4O60810 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PRAMEF4O60810 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PRAMEF4O60810 RNU1-22P-201ENST00000363334 158 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 RNU4-10P-201ENST00000364383 140 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 U8.7-201ENST00000364940 136 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 Y_RNA.571-201ENST00000384753 98 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 RNU6-381P-201ENST00000391259 108 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 RN7SKP51-201ENST00000410781 304 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 AC105272.1-201ENST00000438604 198 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 RPS27P22-201ENST00000478056 241 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 AC097462.1-201ENST00000514125 324 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 RNU6-1219P-201ENST00000516143 112 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 RNU7-115P-201ENST00000516433 55 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 RNU6-63P-201ENST00000516690 95 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 EIF4BP1-201ENST00000554881 351 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.56□□□□□ -2
PRAMEF4O60810 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 AP003357.1-201ENST00000604497 148 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 U6.106-201ENST00000636360 105 ntBASIC2.56□□□□□ -2
PRAMEF4O60810 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PRAMEF4O60810 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PRAMEF4O60810 Y_RNA.464-201ENST00000384282 110 ntBASIC2.55□□□□□ -2
PRAMEF4O60810 MIR518C-201ENST00000384822 101 ntBASIC2.55□□□□□ -2
PRAMEF4O60810 SNORA40.19-201ENST00000390846 128 ntBASIC2.55□□□□□ -2
PRAMEF4O60810 Z92545.1-201ENST00000411782 234 ntBASIC2.55□□□□□ -2
PRAMEF4O60810 HSPE1P21-201ENST00000438283 308 ntBASIC2.55□□□□□ -2
PRAMEF4O60810 AL353689.1-201ENST00000438895 199 ntBASIC2.55□□□□□ -2
PRAMEF4O60810 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.55□□□□□ -2
PRAMEF4O60810 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
PRAMEF4O60810 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.55□□□□□ -2
PRAMEF4O60810 AC015720.1-201ENST00000565251 277 ntBASIC2.55□□□□□ -2
PRAMEF4O60810 MIR4438-201ENST00000585271 93 ntBASIC2.55□□□□□ -2
PRAMEF4O60810 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRAMEF4O60810 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRAMEF4O60810 Y_RNA.7-201ENST00000362352 102 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 VTRNA1-1-201ENST00000363120 99 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 RNU6-1205P-201ENST00000363625 106 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 SNORA80A-201ENST00000363922 136 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 SNORD114-6-201ENST00000364393 72 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 Y_RNA.293-201ENST00000364908 93 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 RNU6-1323P-201ENST00000384025 107 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 MIR9-1-201ENST00000385198 89 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 MIR526A2-201ENST00000390198 65 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 HMGN2P35-201ENST00000412164 270 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 AL135786.1-201ENST00000415892 214 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 HMGN2P34-201ENST00000437647 269 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 RNU1-131P-201ENST00000458943 161 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 AC117454.1-201ENST00000491120 168 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.54□□□□□ -2
PRAMEF4O60810 AC011406.1-201ENST00000512440 370 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.54□□□□□ -2
PRAMEF4O60810 RNA5SP282-201ENST00000516355 108 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 RNU6-1212P-201ENST00000517023 104 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 AC127455.1-201ENST00000565496 145 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 AC005972.2-201ENST00000604690 348 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 AL353149.1-201ENST00000610667 244 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 Y_RNA.802-201ENST00000614892 130 ntBASIC2.54□□□□□ -2
PRAMEF4O60810 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRAMEF4O60810 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
PRAMEF4O60810 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PRAMEF4O60810 snoU2-30.2-201ENST00000362805 70 ntBASIC2.53□□□□□ -2
PRAMEF4O60810 snoU2_19.4-201ENST00000364329 80 ntBASIC2.53□□□□□ -2
PRAMEF4O60810 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.53□□□□□ -2
PRAMEF4O60810 SNORA8.3-201ENST00000384679 139 ntBASIC2.53□□□□□ -2
PRAMEF4O60810 RNU6-1072P-201ENST00000384703 107 ntBASIC2.53□□□□□ -2
PRAMEF4O60810 RNU6-443P-201ENST00000384780 107 ntBASIC2.53□□□□□ -2
PRAMEF4O60810 MIR626-201ENST00000385032 94 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms