Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 snoU13.27-201ENST00000459278 104 ntBASIC1.55□□□□□ -2.16
SNX3O60493 AC005908.1-201ENST00000468701 347 ntBASIC1.55□□□□□ -2.16
SNX3O60493 RNA5SP20-201ENST00000515976 84 ntBASIC1.55□□□□□ -2.16
SNX3O60493 CBX3P4-201ENST00000538909 354 ntBASIC1.55□□□□□ -2.16
SNX3O60493 AC005828.6-201ENST00000606610 232 ntBASIC1.55□□□□□ -2.16
SNX3O60493 AC240442.1-201ENST00000616055 283 ntBASIC1.55□□□□□ -2.16
SNX3O60493 AC007485.1-201ENST00000616755 206 ntBASIC1.55□□□□□ -2.16
SNX3O60493 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
SNX3O60493 AC095038.3-201ENST00000634439 195 ntBASIC1.55□□□□□ -2.16
SNX3O60493 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SNX3O60493 Y_RNA.101-201ENST00000363154 102 ntBASIC1.54□□□□□ -2.16
SNX3O60493 RNU1-22P-201ENST00000363334 158 ntBASIC1.54□□□□□ -2.16
SNX3O60493 RNU6-626P-201ENST00000363354 107 ntBASIC1.54□□□□□ -2.16
SNX3O60493 Y_RNA.243-201ENST00000364481 109 ntBASIC1.54□□□□□ -2.16
SNX3O60493 Y_RNA.813-201ENST00000364639 102 ntBASIC1.54□□□□□ -2.16
SNX3O60493 Y_RNA.395-201ENST00000383945 109 ntBASIC1.54□□□□□ -2.16
SNX3O60493 RNU6-20P-201ENST00000384106 107 ntBASIC1.54□□□□□ -2.16
SNX3O60493 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SNX3O60493 AC019129.1-201ENST00000403786 261 ntBASIC1.54□□□□□ -2.16
SNX3O60493 AC112492.4-201ENST00000456549 352 ntBASIC1.54□□□□□ -2.16
SNX3O60493 AC008834.1-201ENST00000511612 175 ntBASIC1.54□□□□□ -2.16
SNX3O60493 AC097462.1-201ENST00000514125 324 ntBASIC1.54□□□□□ -2.16
SNX3O60493 SNORA44.1-201ENST00000517031 108 ntBASIC1.54□□□□□ -2.16
SNX3O60493 RNU2-12P-201ENST00000517216 168 ntBASIC1.54□□□□□ -2.16
SNX3O60493 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.54□□□□□ -2.16
SNX3O60493 SNORA77B-201ENST00000578179 125 ntBASIC1.54□□□□□ -2.16
SNX3O60493 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.54□□□□□ -2.16
SNX3O60493 AC073413.2-201ENST00000604332 360 ntBASIC1.54□□□□□ -2.16
SNX3O60493 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
SNX3O60493 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SNX3O60493 AC006026.1-201ENST00000444025 1803 ntBASIC1.54□□□□□ -2.16
SNX3O60493 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SNX3O60493 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
SNX3O60493 Y_RNA.124-201ENST00000363339 93 ntBASIC1.53□□□□□ -2.16
SNX3O60493 RNU6-203P-201ENST00000384038 104 ntBASIC1.53□□□□□ -2.16
SNX3O60493 RNU6-308P-201ENST00000390957 107 ntBASIC1.53□□□□□ -2.16
SNX3O60493 MIR1267-201ENST00000408723 78 ntBASIC1.53□□□□□ -2.16
SNX3O60493 COX6CP10-201ENST00000416832 224 ntBASIC1.53□□□□□ -2.16
SNX3O60493 AC010154.1-201ENST00000425857 269 ntBASIC1.53□□□□□ -2.16
SNX3O60493 SDAD1P3-201ENST00000427380 333 ntBASIC1.53□□□□□ -2.16
SNX3O60493 AL160004.2-201ENST00000432935 350 ntBASIC1.53□□□□□ -2.16
SNX3O60493 JTBP1-201ENST00000441314 247 ntBASIC1.53□□□□□ -2.16
SNX3O60493 Y_RNA.639-201ENST00000458981 102 ntBASIC1.53□□□□□ -2.16
SNX3O60493 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.53□□□□□ -2.16
SNX3O60493 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.53□□□□□ -2.16
SNX3O60493 RNA5SP182-201ENST00000516064 82 ntBASIC1.53□□□□□ -2.16
SNX3O60493 SNORA31.10-201ENST00000516482 106 ntBASIC1.53□□□□□ -2.16
SNX3O60493 RNU7-172P-201ENST00000517125 64 ntBASIC1.53□□□□□ -2.16
SNX3O60493 AC100821.1-201ENST00000523153 2479 ntBASIC1.53□□□□□ -2.16
SNX3O60493 AC091544.4-201ENST00000555268 342 ntBASIC1.53□□□□□ -2.16
SNX3O60493 MIR3198-2-201ENST00000577868 80 ntBASIC1.53□□□□□ -2.16
SNX3O60493 MIR4648-201ENST00000580107 72 ntBASIC1.53□□□□□ -2.16
SNX3O60493 AC005176.2-201ENST00000596933 147 ntBASIC1.53□□□□□ -2.16
SNX3O60493 AC090971.5-201ENST00000621102 293 ntBASIC1.53□□□□□ -2.16
SNX3O60493 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.53□□□□□ -2.17
SNX3O60493 MTND4P29-201ENST00000503122 1372 ntBASIC1.52□□□□□ -2.17
SNX3O60493 Y_RNA.31-201ENST00000362574 102 ntBASIC1.52□□□□□ -2.17
SNX3O60493 Y_RNA.394-201ENST00000383942 103 ntBASIC1.52□□□□□ -2.17
SNX3O60493 Y_RNA.535-201ENST00000384612 99 ntBASIC1.52□□□□□ -2.17
SNX3O60493 MIR873-201ENST00000401120 77 ntBASIC1.52□□□□□ -2.17
SNX3O60493 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.52□□□□□ -2.17
SNX3O60493 SNORA40.14-201ENST00000516543 86 ntBASIC1.52□□□□□ -2.17
SNX3O60493 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.52□□□□□ -2.17
SNX3O60493 HSBP1P1-201ENST00000555205 166 ntBASIC1.52□□□□□ -2.17
SNX3O60493 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.52□□□□□ -2.17
SNX3O60493 MIR4709-201ENST00000577272 72 ntBASIC1.52□□□□□ -2.17
SNX3O60493 AL929325.1-201ENST00000603096 117 ntBASIC1.52□□□□□ -2.17
SNX3O60493 AC016925.2-201ENST00000605108 242 ntBASIC1.52□□□□□ -2.17
SNX3O60493 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.52□□□□□ -2.17
SNX3O60493 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.52□□□□□ -2.17
SNX3O60493 AL138825.1-201ENST00000618587 192 ntBASIC1.52□□□□□ -2.17
SNX3O60493 AL160413.1-201ENST00000622780 310 ntBASIC1.52□□□□□ -2.17
SNX3O60493 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
SNX3O60493 AP000648.3-201ENST00000623539 4507 ntBASIC1.51□□□□□ -2.17
SNX3O60493 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNX3O60493 AC091812.1-201ENST00000432235 1948 ntBASIC1.51□□□□□ -2.17
SNX3O60493 RNU6-271P-201ENST00000363858 105 ntBASIC1.51□□□□□ -2.17
SNX3O60493 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
SNX3O60493 SNORD115-30-201ENST00000364117 82 ntBASIC1.51□□□□□ -2.17
SNX3O60493 RNU2-54P-201ENST00000410299 190 ntBASIC1.51□□□□□ -2.17
SNX3O60493 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.51□□□□□ -2.17
SNX3O60493 MTND1P14-201ENST00000427400 950 ntBASIC1.51□□□□□ -2.17
SNX3O60493 AC245047.3-201ENST00000429428 127 ntBASIC1.51□□□□□ -2.17
SNX3O60493 FTH1P12-201ENST00000432137 551 ntBASIC1.51□□□□□ -2.17
SNX3O60493 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.51□□□□□ -2.17
SNX3O60493 RNU7-34P-201ENST00000459394 64 ntBASIC1.51□□□□□ -2.17
SNX3O60493 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
SNX3O60493 RNA5SP61-201ENST00000516453 100 ntBASIC1.51□□□□□ -2.17
SNX3O60493 RNU6-966P-201ENST00000516479 104 ntBASIC1.51□□□□□ -2.17
SNX3O60493 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.51□□□□□ -2.17
SNX3O60493 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.51□□□□□ -2.17
SNX3O60493 MIR8054-201ENST00000620877 86 ntBASIC1.51□□□□□ -2.17
SNX3O60493 AC090574.1-201ENST00000623186 233 ntBASIC1.51□□□□□ -2.17
SNX3O60493 AC018630.2-201ENST00000534866 2403 ntBASIC1.5□□□□□ -2.17
SNX3O60493 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SNX3O60493 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.5□□□□□ -2.17
SNX3O60493 Y_RNA.361-201ENST00000365515 120 ntBASIC1.5□□□□□ -2.17
SNX3O60493 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.5□□□□□ -2.17
SNX3O60493 Y_RNA.445-201ENST00000384168 102 ntBASIC1.5□□□□□ -2.17
SNX3O60493 Y_RNA.458-201ENST00000384240 102 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms