Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
PROM1O43490 MIR196B-201ENST00000384852 84 ntBASIC2.53□□□□□ -2
PROM1O43490 RNU6-57P-201ENST00000411348 103 ntBASIC2.53□□□□□ -2
PROM1O43490 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.53□□□□□ -2
PROM1O43490 AC016717.1-201ENST00000448918 286 ntBASIC2.53□□□□□ -2
PROM1O43490 Y_RNA.662-201ENST00000516028 97 ntBASIC2.53□□□□□ -2
PROM1O43490 MIR4308-201ENST00000580634 81 ntBASIC2.53□□□□□ -2
PROM1O43490 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.53□□□□□ -2
PROM1O43490 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.53□□□□□ -2
PROM1O43490 MIR5739-201ENST00000619803 80 ntBASIC2.53□□□□□ -2
PROM1O43490 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
PROM1O43490 AC134026.1-201ENST00000623249 2239 ntBASIC2.52□□□□□ -2.01
PROM1O43490 Y_RNA.341-201ENST00000365341 102 ntBASIC2.52□□□□□ -2.01
PROM1O43490 MIR524-201ENST00000385242 87 ntBASIC2.52□□□□□ -2.01
PROM1O43490 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PROM1O43490 RNU6-918P-201ENST00000391219 106 ntBASIC2.52□□□□□ -2.01
PROM1O43490 MTCO2P33-201ENST00000402100 465 ntBASIC2.52□□□□□ -2.01
PROM1O43490 AL357139.1-201ENST00000407792 426 ntBASIC2.52□□□□□ -2.01
PROM1O43490 RN7SKP51-201ENST00000410781 304 ntBASIC2.52□□□□□ -2.01
PROM1O43490 RNU2-32P-201ENST00000411193 191 ntBASIC2.52□□□□□ -2.01
PROM1O43490 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.52□□□□□ -2.01
PROM1O43490 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.52□□□□□ -2.01
PROM1O43490 U8.19-201ENST00000459095 133 ntBASIC2.52□□□□□ -2.01
PROM1O43490 Y_RNA.637-201ENST00000459424 114 ntBASIC2.52□□□□□ -2.01
PROM1O43490 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.52□□□□□ -2.01
PROM1O43490 SNORA70.12-201ENST00000516084 153 ntBASIC2.52□□□□□ -2.01
PROM1O43490 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.52□□□□□ -2.01
PROM1O43490 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PROM1O43490 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.52□□□□□ -2.01
PROM1O43490 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.52□□□□□ -2.01
PROM1O43490 MIR6073-201ENST00000352083 89 ntBASIC2.51□□□□□ -2.01
PROM1O43490 RNU6-1048P-201ENST00000364054 107 ntBASIC2.51□□□□□ -2.01
PROM1O43490 RNU6-801P-201ENST00000364087 105 ntBASIC2.51□□□□□ -2.01
PROM1O43490 Y_RNA.287-201ENST00000364853 94 ntBASIC2.51□□□□□ -2.01
PROM1O43490 RNU6-546P-201ENST00000383991 107 ntBASIC2.51□□□□□ -2.01
PROM1O43490 AL135790.2-201ENST00000437701 267 ntBASIC2.51□□□□□ -2.01
PROM1O43490 SNORD109B-201ENST00000458961 67 ntBASIC2.51□□□□□ -2.01
PROM1O43490 SNORD109A-201ENST00000459128 67 ntBASIC2.51□□□□□ -2.01
PROM1O43490 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.51□□□□□ -2.01
PROM1O43490 AC136628.3-201ENST00000521868 290 ntBASIC2.51□□□□□ -2.01
PROM1O43490 AC027419.1-201ENST00000522976 328 ntBASIC2.51□□□□□ -2.01
PROM1O43490 MIR4635-201ENST00000583759 79 ntBASIC2.51□□□□□ -2.01
PROM1O43490 AC245884.12-201ENST00000615364 59 ntBASIC2.51□□□□□ -2.01
PROM1O43490 U4atac.1-201ENST00000618345 95 ntBASIC2.51□□□□□ -2.01
PROM1O43490 snoZ196.1-201ENST00000625269 89 ntBASIC2.51□□□□□ -2.01
PROM1O43490 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PROM1O43490 AP006437.1-201ENST00000641440 3685 ntBASIC2.5□□□□□ -2.01
PROM1O43490 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PROM1O43490 RNU6-653P-201ENST00000363074 106 ntBASIC2.5□□□□□ -2.01
PROM1O43490 Y_RNA.293-201ENST00000364908 93 ntBASIC2.5□□□□□ -2.01
PROM1O43490 SNORD31B-201ENST00000364977 69 ntBASIC2.5□□□□□ -2.01
PROM1O43490 Y_RNA.464-201ENST00000384282 110 ntBASIC2.5□□□□□ -2.01
PROM1O43490 SNORA26.5-201ENST00000391215 123 ntBASIC2.5□□□□□ -2.01
PROM1O43490 RNU2-52P-201ENST00000410680 190 ntBASIC2.5□□□□□ -2.01
PROM1O43490 AL161788.1-201ENST00000441805 169 ntBASIC2.5□□□□□ -2.01
PROM1O43490 AC011753.1-201ENST00000451001 220 ntBASIC2.5□□□□□ -2.01
PROM1O43490 CYP2C59P-201ENST00000457790 269 ntBASIC2.5□□□□□ -2.01
PROM1O43490 RNU6-237P-201ENST00000515985 71 ntBASIC2.5□□□□□ -2.01
PROM1O43490 RNU6-1278P-201ENST00000516130 107 ntBASIC2.5□□□□□ -2.01
PROM1O43490 RNA5SP490-201ENST00000517141 136 ntBASIC2.5□□□□□ -2.01
PROM1O43490 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.5□□□□□ -2.01
PROM1O43490 AC018630.3-201ENST00000542637 96 ntBASIC2.5□□□□□ -2.01
PROM1O43490 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.5□□□□□ -2.01
PROM1O43490 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.5□□□□□ -2.01
PROM1O43490 MIR1248-201ENST00000629190 106 ntBASIC2.5□□□□□ -2.01
PROM1O43490 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PROM1O43490 RNA5SP125-201ENST00000364843 120 ntBASIC2.49□□□□□ -2.01
PROM1O43490 RNU6-418P-201ENST00000384035 107 ntBASIC2.49□□□□□ -2.01
PROM1O43490 RNU6-975P-201ENST00000384296 105 ntBASIC2.49□□□□□ -2.01
PROM1O43490 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.49□□□□□ -2.01
PROM1O43490 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.49□□□□□ -2.01
PROM1O43490 RNU6-1219P-201ENST00000516143 112 ntBASIC2.49□□□□□ -2.01
PROM1O43490 SNORA31.15-201ENST00000516771 132 ntBASIC2.49□□□□□ -2.01
PROM1O43490 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.49□□□□□ -2.01
PROM1O43490 MIR5692C2-201ENST00000577959 77 ntBASIC2.49□□□□□ -2.01
PROM1O43490 MIR3684-201ENST00000579779 74 ntBASIC2.49□□□□□ -2.01
PROM1O43490 AC025754.2-201ENST00000606491 432 ntBASIC2.49□□□□□ -2.01
PROM1O43490 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PROM1O43490 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.48□□□□□ -2.01
PROM1O43490 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PROM1O43490 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PROM1O43490 Y_RNA.124-201ENST00000363339 93 ntBASIC2.48□□□□□ -2.01
PROM1O43490 RNU1-23P-201ENST00000363361 144 ntBASIC2.48□□□□□ -2.01
PROM1O43490 RNU6-407P-201ENST00000365280 104 ntBASIC2.48□□□□□ -2.01
PROM1O43490 RNU4-17P-201ENST00000365598 141 ntBASIC2.48□□□□□ -2.01
PROM1O43490 RNU1-138P-201ENST00000384093 164 ntBASIC2.48□□□□□ -2.01
PROM1O43490 SNORA72.4-201ENST00000384174 132 ntBASIC2.48□□□□□ -2.01
PROM1O43490 SNORA70B-201ENST00000384210 135 ntBASIC2.48□□□□□ -2.01
PROM1O43490 SNORA20B-201ENST00000384220 132 ntBASIC2.48□□□□□ -2.01
PROM1O43490 Y_RNA.456-201ENST00000384232 111 ntBASIC2.48□□□□□ -2.01
PROM1O43490 RNU2-63P-201ENST00000410792 194 ntBASIC2.48□□□□□ -2.01
PROM1O43490 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.48□□□□□ -2.01
PROM1O43490 HSPE1P21-201ENST00000438283 308 ntBASIC2.48□□□□□ -2.01
PROM1O43490 HMGN2P18-201ENST00000450680 270 ntBASIC2.48□□□□□ -2.01
PROM1O43490 RPS20P10-201ENST00000451209 253 ntBASIC2.48□□□□□ -2.01
PROM1O43490 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.48□□□□□ -2.01
PROM1O43490 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.48□□□□□ -2.01
PROM1O43490 AC096725.1-201ENST00000514266 313 ntBASIC2.48□□□□□ -2.01
PROM1O43490 RNU6-255P-201ENST00000516957 105 ntBASIC2.48□□□□□ -2.01
PROM1O43490 AC022616.8-201ENST00000533569 253 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms