Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RPS29P30-201ENST00000600975 111 ntBASIC1.58□□□□□ -2.16
CDX4O14627 AL162730.1-201ENST00000605734 292 ntBASIC1.58□□□□□ -2.16
CDX4O14627 AC011476.5-201ENST00000615594 130 ntBASIC1.58□□□□□ -2.16
CDX4O14627 RMST_2.1-201ENST00000617263 136 ntBASIC1.58□□□□□ -2.16
CDX4O14627 uc_338.20-201ENST00000621563 178 ntBASIC1.58□□□□□ -2.16
CDX4O14627 U6.92-201ENST00000636464 89 ntBASIC1.58□□□□□ -2.16
CDX4O14627 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.57□□□□□ -2.16
CDX4O14627 BX322639.1-202ENST00000423987 2213 ntBASIC1.57□□□□□ -2.16
CDX4O14627 Y_RNA.27-201ENST00000362540 103 ntBASIC1.57□□□□□ -2.16
CDX4O14627 RNU6-1309P-201ENST00000363305 108 ntBASIC1.57□□□□□ -2.16
CDX4O14627 RNU6-137P-201ENST00000363680 108 ntBASIC1.57□□□□□ -2.16
CDX4O14627 RNU5F-3P-201ENST00000363767 117 ntBASIC1.57□□□□□ -2.16
CDX4O14627 RNU6-42P-201ENST00000384165 107 ntBASIC1.57□□□□□ -2.16
CDX4O14627 Y_RNA.471-201ENST00000384312 102 ntBASIC1.57□□□□□ -2.16
CDX4O14627 RNU6-1105P-201ENST00000384774 107 ntBASIC1.57□□□□□ -2.16
CDX4O14627 AC004866.1-201ENST00000411748 78 ntBASIC1.57□□□□□ -2.16
CDX4O14627 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.57□□□□□ -2.16
CDX4O14627 AL358176.2-201ENST00000425769 204 ntBASIC1.57□□□□□ -2.16
CDX4O14627 AC074290.1-201ENST00000448883 135 ntBASIC1.57□□□□□ -2.16
CDX4O14627 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.57□□□□□ -2.16
CDX4O14627 AC010655.3-201ENST00000478818 450 ntBASIC1.57□□□□□ -2.16
CDX4O14627 MRPS17P9-201ENST00000511924 393 ntBASIC1.57□□□□□ -2.16
CDX4O14627 RNU6-397P-201ENST00000516226 104 ntBASIC1.57□□□□□ -2.16
CDX4O14627 MIR2355-201ENST00000517199 87 ntBASIC1.57□□□□□ -2.16
CDX4O14627 AC091144.1-201ENST00000519573 138 ntBASIC1.57□□□□□ -2.16
CDX4O14627 AC131281.1-201ENST00000522984 164 ntBASIC1.57□□□□□ -2.16
CDX4O14627 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.57□□□□□ -2.16
CDX4O14627 AC008269.2-201ENST00000561915 1105 ntBASIC1.57□□□□□ -2.16
CDX4O14627 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
CDX4O14627 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.57□□□□□ -2.16
CDX4O14627 AL096840.1-201ENST00000603287 93 ntBASIC1.57□□□□□ -2.16
CDX4O14627 AL021879.1-201ENST00000611756 288 ntBASIC1.57□□□□□ -2.16
CDX4O14627 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.57□□□□□ -2.16
CDX4O14627 U1.36-201ENST00000620684 176 ntBASIC1.57□□□□□ -2.16
CDX4O14627 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.57□□□□□ -2.16
CDX4O14627 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CDX4O14627 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
CDX4O14627 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
CDX4O14627 RNU6-23P-201ENST00000363283 107 ntBASIC1.56□□□□□ -2.16
CDX4O14627 Y_RNA.133-201ENST00000363428 110 ntBASIC1.56□□□□□ -2.16
CDX4O14627 RNU6-727P-201ENST00000363592 107 ntBASIC1.56□□□□□ -2.16
CDX4O14627 RNU6-280P-201ENST00000364145 104 ntBASIC1.56□□□□□ -2.16
CDX4O14627 Y_RNA.210-201ENST00000364161 110 ntBASIC1.56□□□□□ -2.16
CDX4O14627 Y_RNA.458-201ENST00000384240 102 ntBASIC1.56□□□□□ -2.16
CDX4O14627 RNY3P4-201ENST00000384428 101 ntBASIC1.56□□□□□ -2.16
CDX4O14627 MIR329-1-201ENST00000385028 80 ntBASIC1.56□□□□□ -2.16
CDX4O14627 SNORA67.6-201ENST00000391093 99 ntBASIC1.56□□□□□ -2.16
CDX4O14627 RNU11-3P-201ENST00000391111 133 ntBASIC1.56□□□□□ -2.16
CDX4O14627 MIR1252-201ENST00000408861 65 ntBASIC1.56□□□□□ -2.16
CDX4O14627 SNORD12B-201ENST00000410433 91 ntBASIC1.56□□□□□ -2.16
CDX4O14627 RNU6-130P-201ENST00000411112 103 ntBASIC1.56□□□□□ -2.16
CDX4O14627 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.56□□□□□ -2.16
CDX4O14627 AC004386.2-201ENST00000441858 148 ntBASIC1.56□□□□□ -2.16
CDX4O14627 RPL23AP6-201ENST00000446637 472 ntBASIC1.56□□□□□ -2.16
CDX4O14627 AC007395.1-201ENST00000451333 677 ntBASIC1.56□□□□□ -2.16
CDX4O14627 RNU1-131P-201ENST00000458943 161 ntBASIC1.56□□□□□ -2.16
CDX4O14627 AC114982.1-201ENST00000469402 321 ntBASIC1.56□□□□□ -2.16
CDX4O14627 RNU2-44P-201ENST00000516795 194 ntBASIC1.56□□□□□ -2.16
CDX4O14627 AC015720.1-201ENST00000565251 277 ntBASIC1.56□□□□□ -2.16
CDX4O14627 MIR4659A-201ENST00000580269 81 ntBASIC1.56□□□□□ -2.16
CDX4O14627 MIR5006-201ENST00000583027 110 ntBASIC1.56□□□□□ -2.16
CDX4O14627 AL109918.3-201ENST00000603072 338 ntBASIC1.56□□□□□ -2.16
CDX4O14627 AL390123.1-201ENST00000603216 237 ntBASIC1.56□□□□□ -2.16
CDX4O14627 MZT1P2-201ENST00000604387 248 ntBASIC1.56□□□□□ -2.16
CDX4O14627 RAC1P9-201ENST00000604990 392 ntBASIC1.56□□□□□ -2.16
CDX4O14627 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.56□□□□□ -2.16
CDX4O14627 AC010999.1-201ENST00000611856 324 ntBASIC1.56□□□□□ -2.16
CDX4O14627 AL357075.2-201ENST00000614906 189 ntBASIC1.56□□□□□ -2.16
CDX4O14627 AC091932.3-201ENST00000624223 323 ntBASIC1.56□□□□□ -2.16
CDX4O14627 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
CDX4O14627 LINC02555-201ENST00000563933 1951 ntBASIC1.56□□□□□ -2.16
CDX4O14627 RNU6-238P-201ENST00000363313 106 ntBASIC1.55□□□□□ -2.16
CDX4O14627 Y_RNA.214-201ENST00000364201 112 ntBASIC1.55□□□□□ -2.16
CDX4O14627 RNU4-50P-201ENST00000364361 141 ntBASIC1.55□□□□□ -2.16
CDX4O14627 RNU6-1164P-201ENST00000364428 107 ntBASIC1.55□□□□□ -2.16
CDX4O14627 Y_RNA.380-201ENST00000365663 111 ntBASIC1.55□□□□□ -2.16
CDX4O14627 RNU6-245P-201ENST00000384020 107 ntBASIC1.55□□□□□ -2.16
CDX4O14627 RNU6-1145P-201ENST00000384246 107 ntBASIC1.55□□□□□ -2.16
CDX4O14627 Y_RNA.512-201ENST00000384518 102 ntBASIC1.55□□□□□ -2.16
CDX4O14627 Y_RNA.526-201ENST00000384572 110 ntBASIC1.55□□□□□ -2.16
CDX4O14627 Y_RNA.551-201ENST00000384661 102 ntBASIC1.55□□□□□ -2.16
CDX4O14627 MIR568-201ENST00000385036 95 ntBASIC1.55□□□□□ -2.16
CDX4O14627 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CDX4O14627 MIR548F4-201ENST00000408515 105 ntBASIC1.55□□□□□ -2.16
CDX4O14627 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.55□□□□□ -2.16
CDX4O14627 ELOCP20-201ENST00000422460 345 ntBASIC1.55□□□□□ -2.16
CDX4O14627 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.55□□□□□ -2.16
CDX4O14627 MTND3P2-201ENST00000438452 342 ntBASIC1.55□□□□□ -2.16
CDX4O14627 RPEP5-201ENST00000441137 268 ntBASIC1.55□□□□□ -2.16
CDX4O14627 AC009237.7-201ENST00000447357 229 ntBASIC1.55□□□□□ -2.16
CDX4O14627 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.55□□□□□ -2.16
CDX4O14627 AC016925.1-201ENST00000458303 298 ntBASIC1.55□□□□□ -2.16
CDX4O14627 AC091179.3-201ENST00000474761 144 ntBASIC1.55□□□□□ -2.16
CDX4O14627 MRPS35P2-201ENST00000508242 191 ntBASIC1.55□□□□□ -2.16
CDX4O14627 RNU6-1012P-201ENST00000516606 109 ntBASIC1.55□□□□□ -2.16
CDX4O14627 RNU6-635P-201ENST00000516651 102 ntBASIC1.55□□□□□ -2.16
CDX4O14627 RRN3P3-201ENST00000549207 578 ntBASIC1.55□□□□□ -2.16
CDX4O14627 AL161670.1-201ENST00000554348 137 ntBASIC1.55□□□□□ -2.16
CDX4O14627 AL117187.1-201ENST00000555482 181 ntBASIC1.55□□□□□ -2.16
CDX4O14627 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms