Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC018865.2-201ENST00000423631 129 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 STAG3L5P-204ENST00000443759 179 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.26□□□□□ -2.21
SLC28A1O00337 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.26□□□□□ -2.21
SLC28A1O00337 MIR2053-201ENST00000459295 91 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.26□□□□□ -2.21
SLC28A1O00337 SNORA40.9-201ENST00000515895 93 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 RNA5SP20-201ENST00000515976 84 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 AL161670.1-201ENST00000554348 137 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 AC073349.3-201ENST00000617616 186 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 TPTEP1-208ENST00000636884 213 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 SNORA27.1-201ENST00000362604 124 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 RNU1-17P-201ENST00000363022 152 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 RNU6-99P-201ENST00000364721 107 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 RNU6-318P-201ENST00000384283 103 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 MIR562-201ENST00000384894 95 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 FGF7P8-201ENST00000402994 292 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 RNA5SP475-201ENST00000410568 110 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 RNU4-14P-201ENST00000410858 122 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 RNU6-370P-201ENST00000411008 104 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.25□□□□□ -2.21
SLC28A1O00337 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.25□□□□□ -2.21
SLC28A1O00337 SDAD1P3-201ENST00000427380 333 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 RAB28P5-201ENST00000427490 651 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 RNU1-123P-201ENST00000458950 160 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 MIR2355-201ENST00000517199 87 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 AP003033.1-201ENST00000527244 415 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 AC016727.1-205ENST00000605437 569 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 MIR7843-201ENST00000622274 79 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 SNORD3E-202ENST00000627253 216 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 MIR3674-201ENST00000636576 68 ntBASIC1.25□□□□□ -2.21
SLC28A1O00337 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SLC28A1O00337 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
SLC28A1O00337 SNORA12.1-201ENST00000390873 148 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.24□□□□□ -2.21
SLC28A1O00337 RPL39P38-201ENST00000467018 153 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 AC108210.2-201ENST00000503681 201 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 RN7SKP88-201ENST00000516847 250 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 RNU6-264P-201ENST00000517134 104 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.24□□□□□ -2.21
SLC28A1O00337 AC080078.3-201ENST00000605407 463 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 7SK.8-201ENST00000612110 250 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 7SK.11-201ENST00000615477 250 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 AC022306.2-201ENST00000617563 647 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 7SK.13-201ENST00000622040 250 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 U6.115-201ENST00000636045 103 ntBASIC1.24□□□□□ -2.21
SLC28A1O00337 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SLC28A1O00337 RNU6-1301P-201ENST00000362724 104 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 SNORD81.2-201ENST00000365153 76 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 RNU6-376P-201ENST00000384731 106 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 MIR625-201ENST00000385047 85 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 MIR660-201ENST00000385235 97 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SLC28A1O00337 SNORA11.2-201ENST00000408318 127 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 SNORD12B-201ENST00000410433 91 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 SUMO1P2-201ENST00000452524 304 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.23□□□□□ -2.21
SLC28A1O00337 snoU13.23-201ENST00000458863 104 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 AC091021.1-201ENST00000468051 388 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.23□□□□□ -2.21
SLC28A1O00337 RNU6-1278P-201ENST00000516130 107 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 RNU2-56P-201ENST00000516826 190 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 AP002001.1-203ENST00000534002 267 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 MIR3664-201ENST00000579074 99 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 MIR4303-201ENST00000581299 66 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 MIR5690-201ENST00000583739 73 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 AL512598.1-201ENST00000610158 273 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 MIR8065-201ENST00000620577 100 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 AL359757.2-201ENST00000624309 274 ntBASIC1.23□□□□□ -2.21
SLC28A1O00337 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SLC28A1O00337 Y_RNA.265-201ENST00000364677 108 ntBASIC1.22□□□□□ -2.21
SLC28A1O00337 RNU6-1310P-201ENST00000384153 107 ntBASIC1.22□□□□□ -2.21
SLC28A1O00337 Y_RNA.577-201ENST00000384794 101 ntBASIC1.22□□□□□ -2.21
SLC28A1O00337 SNORA69.1-201ENST00000390904 137 ntBASIC1.22□□□□□ -2.21
SLC28A1O00337 SNORA75.6-201ENST00000391318 127 ntBASIC1.22□□□□□ -2.21
SLC28A1O00337 MIR873-201ENST00000401120 77 ntBASIC1.22□□□□□ -2.21
SLC28A1O00337 RNU6-341P-201ENST00000516973 96 ntBASIC1.22□□□□□ -2.21
SLC28A1O00337 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
SLC28A1O00337 AC091812.1-201ENST00000432235 1948 ntBASIC1.22□□□□□ -2.21
SLC28A1O00337 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SLC28A1O00337 RNU6-1188P-201ENST00000363795 107 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 RNU6-454P-201ENST00000364292 107 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 RNU4-76P-201ENST00000364509 141 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 Y_RNA.267-201ENST00000364679 109 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 RNU6-505P-201ENST00000384427 107 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 RNU6-310P-201ENST00000384655 107 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 Y_RNA.646-201ENST00000410980 101 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 AL137792.2-201ENST00000443484 235 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 AC092991.1-201ENST00000477176 376 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 AC022493.2-201ENST00000506122 481 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.21□□□□□ -2.22
SLC28A1O00337 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 AL353997.5-201ENST00000618886 171 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 AC106754.2-201ENST00000623006 233 ntBASIC1.21□□□□□ -2.22
SLC28A1O00337 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SLC28A1O00337 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms