Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RFXAPO00287 RNY4P30-201ENST00000410216 95 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 RNA5SP129-201ENST00000410276 118 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 AL135786.1-201ENST00000415892 214 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.07□□□□□ -1.92
RFXAPO00287 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.07□□□□□ -1.92
RFXAPO00287 AC245047.4-201ENST00000433189 144 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 snoU13.28-201ENST00000459235 104 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 snoU13.15-201ENST00000459407 104 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 AP000873.1-201ENST00000463987 400 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 AC107626.1-201ENST00000471084 183 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 RNA5SP148-201ENST00000516527 94 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 Y_RNA.692-201ENST00000516627 105 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 HSPE1P18-201ENST00000517602 280 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 AC027176.1-201ENST00000560204 514 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 AL049861.1-201ENST00000603130 150 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 AP003357.1-201ENST00000604497 148 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 HSPE1P7-201ENST00000604681 321 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 AL021707.8-201ENST00000609428 183 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 MIR6817-201ENST00000615588 66 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 AL138880.2-201ENST00000616214 239 ntBASIC3.07□□□□□ -1.92
RFXAPO00287 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RFXAPO00287 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.07□□□□□ -1.92
RFXAPO00287 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.07□□□□□ -1.92
RFXAPO00287 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.07□□□□□ -1.92
RFXAPO00287 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RFXAPO00287 AL356292.1-201ENST00000283110 373 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 Y_RNA.91-201ENST00000363042 107 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 RNU6-309P-201ENST00000364573 106 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RFXAPO00287 DYNLT3P1-201ENST00000378574 347 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 RN7SKP101-201ENST00000411376 320 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.06□□□□□ -1.92
RFXAPO00287 RNA5SP310-201ENST00000459084 116 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 snoU13.14-201ENST00000459372 104 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 RPS26P45-201ENST00000471748 340 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 AC021205.2-201ENST00000480069 347 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.06□□□□□ -1.92
RFXAPO00287 RNU6-844P-201ENST00000517175 102 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RFXAPO00287 MIR3690-201ENST00000580266 75 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 AL110115.1-201ENST00000614396 364 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 SNORA50A-202ENST00000629536 136 ntBASIC3.06□□□□□ -1.92
RFXAPO00287 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RFXAPO00287 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RFXAPO00287 Y_RNA.116-201ENST00000363292 103 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 Y_RNA.120-201ENST00000363304 110 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 RNY3P5-201ENST00000384127 102 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 SNORD14D-201ENST00000384390 87 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 SNORA67.4-201ENST00000384688 142 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 SNORA3.2-201ENST00000408221 125 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 Y_RNA.617-201ENST00000410920 90 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 HMGN2P9-201ENST00000476875 229 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.05□□□□□ -1.92
RFXAPO00287 AC092185.1-201ENST00000491371 97 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 RPL23AP54-201ENST00000495129 419 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 SNORA70.12-201ENST00000516084 153 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 Y_RNA.694-201ENST00000516677 117 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 RNU6-197P-201ENST00000516680 100 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 AC104027.1-201ENST00000521887 300 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 AC027419.1-201ENST00000522976 328 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 AL121890.5-201ENST00000620848 304 ntBASIC3.05□□□□□ -1.92
RFXAPO00287 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.05□□□□□ -1.92
RFXAPO00287 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RFXAPO00287 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
RFXAPO00287 RNU6-859P-201ENST00000362728 107 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 SNORA72-201ENST00000384339 132 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 RNU6-19P-201ENST00000384718 107 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 MIR1185-2-201ENST00000408687 86 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 AC245291.1-201ENST00000419501 328 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.04□□□□□ -1.92
RFXAPO00287 AL365496.1-201ENST00000426885 215 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 RPS3P1-201ENST00000456781 192 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 RNU6-437P-201ENST00000459408 95 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 Y_RNA.690-201ENST00000516603 95 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 SCARNA20.6-201ENST00000517251 106 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 AC068657.1-201ENST00000520807 306 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 IGKV1-22-201ENST00000524313 326 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 POLR3GP1-201ENST00000594073 261 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.04□□□□□ -1.92
RFXAPO00287 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
RFXAPO00287 AL136964.1-201ENST00000622038 2990 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 AC096644.4-201ENST00000563417 2912 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.03□□□□□ -1.92
RFXAPO00287 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RFXAPO00287 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFXAPO00287 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RFXAPO00287 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RFXAPO00287 RNU6-1010P-201ENST00000362757 107 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 RNU4-41P-201ENST00000364426 143 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 RNU6-32P-201ENST00000383948 107 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 RNU6-13P-201ENST00000384248 107 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 RNU6-12P-201ENST00000384604 107 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 RNU6-41P-201ENST00000384741 107 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 MIRLET7F2-201ENST00000385277 83 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 MIR873-201ENST00000401120 77 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 AL138827.1-201ENST00000402666 306 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.03□□□□□ -1.92
RFXAPO00287 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.03□□□□□ -1.92
RFXAPO00287 MIR449C-201ENST00000516047 92 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms