Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MIR6514-201ENST00000622549 70 ntBASIC-0.97□□□□□ -2.56
CHKB-CPT1BH3BT56 AC019226.2-201ENST00000625973 424 ntBASIC-0.97□□□□□ -2.56
CHKB-CPT1BH3BT56 SCARNA4-201ENST00000629045 128 ntBASIC-0.97□□□□□ -2.56
CHKB-CPT1BH3BT56 AC091304.10-201ENST00000641554 121 ntBASIC-0.97□□□□□ -2.56
CHKB-CPT1BH3BT56 MTND4P9-201ENST00000507819 1346 ntBASIC-0.97□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU6-609P-201ENST00000365459 107 ntBASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU6-39P-201ENST00000384344 107 ntBASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 AL022718.1-201ENST00000412004 84 ntBASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 ELOCP21-201ENST00000412558 336 ntBASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 RNA5SP337-201ENST00000517007 109 ntBASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 AL109933.3-201ENST00000619095 188 ntBASIC-0.98□□□□□ -2.57
CHKB-CPT1BH3BT56 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 SNORA25.7-201ENST00000364375 127 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 U8.5-201ENST00000364528 136 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU6-723P-201ENST00000383973 107 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR320B2-201ENST00000408479 138 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 RN7SKP142-201ENST00000411236 328 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 MTND4LP16-201ENST00000440828 295 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 AC109327.2-201ENST00000448339 378 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU6-323P-201ENST00000521915 107 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 AC090617.3-201ENST00000573670 475 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR4752-201ENST00000579672 72 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 AC006380.1-201ENST00000603598 186 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 AC121334.2-201ENST00000605387 271 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 AC091948.2-201ENST00000636510 279 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 AC006927.2-201ENST00000639256 389 ntBASIC-0.99□□□□□ -2.57
CHKB-CPT1BH3BT56 Y_RNA.578-201ENST00000390903 88 ntBASIC-1□□□□□ -2.57
CHKB-CPT1BH3BT56 RNA5SP494-201ENST00000410653 129 ntBASIC-1□□□□□ -2.57
CHKB-CPT1BH3BT56 ZNF114P1-201ENST00000453500 292 ntBASIC-1□□□□□ -2.57
CHKB-CPT1BH3BT56 SNORA18.4-201ENST00000516440 124 ntBASIC-1□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU7-156P-201ENST00000517214 74 ntBASIC-1□□□□□ -2.57
CHKB-CPT1BH3BT56 AF250324.2-201ENST00000608299 610 ntBASIC-1□□□□□ -2.57
CHKB-CPT1BH3BT56 AL139418.1-201ENST00000613613 177 ntBASIC-1□□□□□ -2.57
CHKB-CPT1BH3BT56 AC022306.3-201ENST00000619930 550 ntBASIC-1□□□□□ -2.57
CHKB-CPT1BH3BT56 uc_338.22-201ENST00000622722 187 ntBASIC-1□□□□□ -2.57
CHKB-CPT1BH3BT56 AC099786.3-201ENST00000565735 1410 ntBASIC-1□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU6-811P-201ENST00000384069 107 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR558-201ENST00000384920 94 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 USP9YP21-201ENST00000420603 432 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 AC010598.1-201ENST00000510378 103 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 RNA5SP47-201ENST00000517230 109 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 AC018448.1-201ENST00000552843 316 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR4762-201ENST00000585261 75 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR4436A-201ENST00000585278 85 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 Pinc.1-201ENST00000616452 154 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 AL445984.1-201ENST00000637834 659 ntBASIC-1.01□□□□□ -2.57
CHKB-CPT1BH3BT56 SNORD114-14-201ENST00000362723 75 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 RNA5SP98-201ENST00000363158 137 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU6-433P-201ENST00000363216 104 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR489-201ENST00000384923 84 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 MTCO2P33-201ENST00000402100 465 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 RPL21P38-201ENST00000418090 167 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 RNA5SP285-201ENST00000516619 119 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU2-12P-201ENST00000517216 168 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR4307-201ENST00000582802 84 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 AL590491.3-201ENST00000610731 82 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 AC016597.2-201ENST00000613256 341 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR6759-201ENST00000638110 65 ntBASIC-1.02□□□□□ -2.57
CHKB-CPT1BH3BT56 RNU6-125P-201ENST00000384505 107 ntBASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 SNORD28B-201ENST00000390993 75 ntBASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR1287-201ENST00000408492 90 ntBASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 MTND4P3-201ENST00000417829 541 ntBASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 MTCO2P6-201ENST00000463134 685 ntBASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 MTND1P5-201ENST00000517906 940 ntBASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 AC022616.6-201ENST00000520479 119 ntBASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR548AR-201ENST00000582191 57 ntBASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR3925-201ENST00000584674 77 ntBASIC-1.03□□□□□ -2.57
CHKB-CPT1BH3BT56 MIR655-201ENST00000362159 97 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 SNORD68-201ENST00000363214 84 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-873P-201ENST00000363833 107 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 SNORD87-201ENST00000364849 89 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-715P-201ENST00000365204 103 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-641P-201ENST00000384006 107 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 RNU6-224P-201ENST00000384055 107 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 SNORA75.1-201ENST00000391130 148 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 MTCYBP36-201ENST00000404146 440 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 AL390729.2-201ENST00000416137 156 ntBASIC-1.04□□□□□ -2.58
CHKB-CPT1BH3BT56 AL365184.2-201ENST00000431139 435 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms