Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 Y_RNA.322-201ENST00000365151 102 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.368-201ENST00000365547 113 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.456-201ENST00000384232 111 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.500-201ENST00000384466 111 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR29C-201ENST00000385231 88 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR181B1-201ENST00000385240 110 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORA26.5-201ENST00000391215 123 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 HSPE1P13-201ENST00000451143 297 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 RPS20P10-201ENST00000451209 253 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.650-201ENST00000459002 102 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.777-201ENST00000516982 102 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 AP005660.1-201ENST00000522972 293 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR3668-201ENST00000582138 75 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.771-201ENST00000598668 102 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL008718.3-201ENST00000610217 321 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.789-201ENST00000622480 102 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR338-201ENST00000636369 67 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 VTRNA1-1-201ENST00000363120 99 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU1-22P-201ENST00000363334 158 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORA33-201ENST00000363664 130 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-211P-201ENST00000384047 107 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORA72.4-201ENST00000384174 132 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-1186P-201ENST00000410429 97 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC108938.1-201ENST00000451204 136 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORD2.1-201ENST00000458762 69 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 U8.19-201ENST00000459095 133 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.637-201ENST00000459424 114 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 RN7SL636P-201ENST00000497504 294 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC097462.1-201ENST00000514125 324 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC096725.1-201ENST00000514266 313 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNA5SP76-201ENST00000516277 87 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU7-172P-201ENST00000517125 64 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC130289.1-201ENST00000577321 73 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR4635-201ENST00000583759 79 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC009779.6-201ENST00000603972 165 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC004832.4-201ENST00000608952 331 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL442067.1-201ENST00000613261 223 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 U6.73-201ENST00000619194 103 ntBASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
IGHV4-28A0A0C4DH34 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU1-58P-201ENST00000362413 163 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-862P-201ENST00000362804 105 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORA3A-201ENST00000364113 130 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNY1-201ENST00000364228 113 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.292-201ENST00000364904 97 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-117P-201ENST00000365415 107 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU1-52P-201ENST00000384190 164 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-136P-201ENST00000384663 107 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR518C-201ENST00000384822 101 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR597-201ENST00000384968 97 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNA5SP467-201ENST00000391274 118 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 MTCO2P33-201ENST00000402100 465 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL117342.1-201ENST00000404861 406 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNA5SP270-201ENST00000411361 118 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 HSPE1P21-201ENST00000438283 308 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.638-201ENST00000459374 113 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR3162-201ENST00000581818 82 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR4282-201ENST00000583613 67 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL353149.1-201ENST00000610667 244 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC068647.2-201ENST00000637380 353 ntBASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
IGHV4-28A0A0C4DH34 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-376P-201ENST00000384731 106 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR518A2-201ENST00000384966 87 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU11-3P-201ENST00000391111 133 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 HMGN2P39-201ENST00000398005 273 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR1298-201ENST00000408783 112 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 EBAG9P1-201ENST00000418955 543 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC010154.1-201ENST00000425857 269 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 RN7SL297P-201ENST00000483161 293 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-1278P-201ENST00000516130 107 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR4672-201ENST00000583126 81 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC007229.1-201ENST00000590455 412 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL078604.3-201ENST00000615580 211 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC073349.3-201ENST00000617616 186 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC022513.1-201ENST00000624512 117 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 AP006437.1-201ENST00000641440 3685 ntBASIC1.91□□□□□ -2.1
IGHV4-28A0A0C4DH34 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms