Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 Y_RNA.121-201ENST00000363309 113 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 snoU2_19.4-201ENST00000364329 80 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 Y_RNA.240-201ENST00000364469 95 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 SNORA72-201ENST00000384339 132 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 AL117342.1-201ENST00000404861 406 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 RNU6-383P-201ENST00000410864 94 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 RNU6-437P-201ENST00000459408 95 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 AL049873.1-201ENST00000480540 376 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 SCARNA13-201ENST00000516672 275 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 MIR4325-201ENST00000583049 90 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 AC017071.1-201ENST00000564407 2204 ntBASIC2.76□□□□□ -1.97
TRAV20A0A0B4J274 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 AC108206.1-201ENST00000570186 4159 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 AP006437.1-201ENST00000641440 3685 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 RNU6-862P-201ENST00000362804 105 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 Y_RNA.182-201ENST00000363880 111 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 MIR128-1-201ENST00000384921 82 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 SNORA48.2-201ENST00000390926 124 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 RNA5SP323-201ENST00000391094 133 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 AL451074.5-201ENST00000415894 435 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 RPS4XP11-201ENST00000446897 772 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 AC115115.1-201ENST00000449927 248 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 RNU1-142P-201ENST00000516682 145 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 RNA5SP137-201ENST00000516833 135 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 RNU7-128P-201ENST00000517247 62 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRAV20A0A0B4J274 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 RNU1-58P-201ENST00000362413 163 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 SNORA33-201ENST00000363664 130 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 RNU6-103P-201ENST00000363686 107 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 RNU1-109P-201ENST00000383960 147 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 MIR515-2-201ENST00000384883 83 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 MIR515-1-201ENST00000384884 83 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 RNU11-5P-201ENST00000391216 129 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 CST2P1-201ENST00000425770 87 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 RN7SL504P-201ENST00000494496 287 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 RNA5SP76-201ENST00000516277 87 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 MIR2276-201ENST00000516886 89 ntBASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.74□□□□□ -1.97
TRAV20A0A0B4J274 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 Y_RNA.111-201ENST00000363248 100 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 Y_RNA.464-201ENST00000384282 110 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 MIR520G-201ENST00000385064 90 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 BX510359.4-201ENST00000423750 193 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 AC018634.1-201ENST00000437554 401 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 Y_RNA.797-201ENST00000515977 94 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 RNU6-1096P-201ENST00000517089 102 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 MRPS18CP4-201ENST00000535821 231 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 AC011604.1-201ENST00000545978 196 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 AL162274.2-201ENST00000614406 332 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 AC022149.2-201ENST00000621061 203 ntBASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TRAV20A0A0B4J274 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 RNA5SP374-201ENST00000362939 125 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 Y_RNA.229-201ENST00000364347 113 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 Y_RNA.412-201ENST00000384001 104 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 SNORA8-201ENST00000384574 139 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 MIR616-201ENST00000385293 97 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 AL603908.1-201ENST00000406098 201 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 AC245047.8-201ENST00000456455 284 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 AC091021.1-201ENST00000468051 388 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 RPS27AP9-201ENST00000477681 438 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 RNU6-1007P-201ENST00000516586 107 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 MIR4744-201ENST00000581563 82 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 AL929325.1-201ENST00000603096 117 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 U6.108-201ENST00000637764 58 ntBASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TRAV20A0A0B4J274 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
TRAV20A0A0B4J274 Y_RNA.75-201ENST00000362927 97 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms