Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 MIR4635-201ENST00000583759 79 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 AC068205.3-201ENST00000636385 468 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 AL161431.1-201ENST00000618966 4205 ntBASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 Y_RNA.415-201ENST00000384012 112 ntBASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 Y_RNA.568-201ENST00000384742 113 ntBASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 RNU6-1199P-201ENST00000411249 104 ntBASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 AC009963.1-201ENST00000417265 157 ntBASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 RNU7-14P-201ENST00000459331 62 ntBASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 RNA5SP320-201ENST00000516263 124 ntBASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 AC004486.1-201ENST00000546846 233 ntBASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.47□□□□□ -2.01
CCDC187A0A096LP49 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.01
CCDC187A0A096LP49 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.331-201ENST00000365267 102 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 RNU6-514P-201ENST00000384208 107 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 SNORA67.2-201ENST00000384300 149 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 MIR300-201ENST00000401138 83 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 RNA5SP504-201ENST00000410676 117 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 AL135786.1-201ENST00000415892 214 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 POLR2KP2-201ENST00000438155 177 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 SRIP1-201ENST00000489235 288 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 RNU6-191P-201ENST00000516295 94 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 RNU1-117P-201ENST00000517041 158 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 AC018448.1-201ENST00000552843 316 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 AC005828.6-201ENST00000606610 232 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 MIR7843-201ENST00000622274 79 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 AC008873.1-201ENST00000625051 138 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 MIR1248-201ENST00000629190 106 ntBASIC2.46□□□□□ -2.02
CCDC187A0A096LP49 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.262-201ENST00000364641 102 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 SNORD31B-201ENST00000364977 69 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 RNU6-211P-201ENST00000384047 107 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.498-201ENST00000384460 102 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 MIR586-201ENST00000385035 97 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 MIR504-201ENST00000385065 83 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 RNU6-1168P-201ENST00000390831 104 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.586-201ENST00000391146 98 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 AL357139.1-201ENST00000407792 426 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 RNA5SP425-201ENST00000410336 112 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 RNU4-53P-201ENST00000410828 140 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 AL162725.1-201ENST00000435405 301 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 RNU6-625P-201ENST00000459412 107 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 AP005660.1-201ENST00000522972 293 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 MIR3670-2-201ENST00000582974 65 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 MIR3670-1-201ENST00000584160 65 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 MIR3670-3-201ENST00000584855 65 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 AC005176.2-201ENST00000596933 147 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 AL008718.3-201ENST00000610217 321 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 MIR3670-4-201ENST00000612260 65 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 snoU18.1-201ENST00000629629 71 ntBASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC187A0A096LP49 RNA5SP289-201ENST00000362332 137 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.101-201ENST00000363154 102 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 RNU4-80P-201ENST00000363200 141 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 RNU6-818P-201ENST00000364837 108 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 SNORD116-18-201ENST00000383961 92 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 SNORA22C-201ENST00000384614 134 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 Y_RNA.571-201ENST00000384753 98 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 MIR1283-1-201ENST00000408494 87 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 ELOCP21-201ENST00000412558 336 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 SUMO1P4-201ENST00000429430 302 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 AC005042.3-201ENST00000453230 174 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 ATP5EP1-201ENST00000510257 156 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 HMGB3P3-201ENST00000510526 400 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 RNU6-237P-201ENST00000515985 71 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 AP002001.1-203ENST00000534002 267 ntBASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC187A0A096LP49 MTND1P7-201ENST00000632801 297 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms