Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 RNA5SP344-201ENST00000411081 104 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 AC003982.1-202ENST00000469928 248 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 AC010598.1-201ENST00000510378 103 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 RNU6-436P-201ENST00000516171 114 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 AC087441.2-201ENST00000529141 262 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 CYCSP26-201ENST00000534107 320 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 MIR3126-201ENST00000577443 74 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 MIR3128-201ENST00000581957 66 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 AL512605.2-201ENST00000592972 256 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 MIR7111-201ENST00000619751 72 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 U4.3-201ENST00000621047 82 ntBASIC2.96□□□□□ -1.94
PTCH2Q9Y6C5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 MIR26A1-201ENST00000362205 77 ntBASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 RNU6-1240P-201ENST00000365155 104 ntBASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 Y_RNA.361-201ENST00000365515 120 ntBASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 Y_RNA.477-201ENST00000384352 108 ntBASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 DEFB117-201ENST00000602356 141 ntBASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 BX284668.6-201ENST00000606899 438 ntBASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 AL353997.5-201ENST00000618886 171 ntBASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PTCH2Q9Y6C5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 AL159152.1-201ENST00000635019 2587 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 Y_RNA.20-201ENST00000362479 113 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 SNORD114-1-201ENST00000362705 72 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 Y_RNA.60-201ENST00000362831 98 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 RNU4-80P-201ENST00000363200 141 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 RNU6-379P-201ENST00000363813 104 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 RNU1-91P-201ENST00000364746 163 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 MIR873-201ENST00000401120 77 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 AL603910.2-201ENST00000407268 136 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 RNU1-131P-201ENST00000458943 161 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 AC091959.1-201ENST00000495857 238 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 RN7SL636P-201ENST00000497504 294 ntBASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PTCH2Q9Y6C5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 Y_RNA.54-201ENST00000362766 105 ntBASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 AC007064.1-201ENST00000412238 351 ntBASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 AC010154.1-201ENST00000425857 269 ntBASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 AL356320.1-201ENST00000429616 163 ntBASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 RPS29P6-201ENST00000438196 145 ntBASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 RNU6-1146P-201ENST00000516282 102 ntBASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 Y_RNA.680-201ENST00000516441 93 ntBASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 MIR3145-201ENST00000580727 82 ntBASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 MIR3605-201ENST00000583214 100 ntBASIC2.93□□□□□ -1.94
PTCH2Q9Y6C5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 UBE2WP1-201ENST00000362030 340 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 MIR340-201ENST00000362125 95 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 Y_RNA.4-201ENST00000362333 112 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 Y_RNA.164-201ENST00000363709 102 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 SNORD27-201ENST00000363981 72 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 Y_RNA.275-201ENST00000364726 110 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 SNORA20B-201ENST00000384220 132 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 RNU1-148P-201ENST00000384472 162 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 Y_RNA.552-201ENST00000384665 112 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 MIR29C-201ENST00000385231 88 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 MIR1253-201ENST00000408273 105 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 RNU2-61P-201ENST00000411069 191 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 SNORD65B-201ENST00000459126 73 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 SNORA27.4-201ENST00000516650 95 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 MIR1273D-201ENST00000577266 86 ntBASIC2.92□□□□□ -1.94
PTCH2Q9Y6C5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 MIR181A2-201ENST00000384863 110 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 MIR1262-201ENST00000408276 93 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 AC244505.4-201ENST00000434905 287 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 SSXP5-201ENST00000443473 287 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 RPL23AP7-203ENST00000449021 469 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 MTND1P19-201ENST00000511780 315 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 RNU6-191P-201ENST00000516295 94 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 SNORA9.3-201ENST00000516383 129 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 MIR4635-201ENST00000583759 79 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 MIR4658-201ENST00000584344 65 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 AL162424.1-201ENST00000602325 221 ntBASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PTCH2Q9Y6C5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
PTCH2Q9Y6C5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PTCH2Q9Y6C5 SNORA27.1-201ENST00000362604 124 ntBASIC2.9□□□□□ -1.95
PTCH2Q9Y6C5 RNU1-109P-201ENST00000383960 147 ntBASIC2.9□□□□□ -1.95
PTCH2Q9Y6C5 AL355796.1-201ENST00000406706 323 ntBASIC2.9□□□□□ -1.95
PTCH2Q9Y6C5 AC016909.1-201ENST00000415916 166 ntBASIC2.9□□□□□ -1.95
PTCH2Q9Y6C5 AL353689.1-201ENST00000438895 199 ntBASIC2.9□□□□□ -1.95
PTCH2Q9Y6C5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms