Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC010401.1-201ENST00000463867 348 ntBASIC3.06□□□□□ -1.92
HCFC2Q9Y5Z7 AC114982.1-201ENST00000469402 321 ntBASIC3.06□□□□□ -1.92
HCFC2Q9Y5Z7 RNU6-1333P-201ENST00000516162 93 ntBASIC3.06□□□□□ -1.92
HCFC2Q9Y5Z7 RNU6-1098P-201ENST00000516772 96 ntBASIC3.06□□□□□ -1.92
HCFC2Q9Y5Z7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.06□□□□□ -1.92
HCFC2Q9Y5Z7 AL359881.1-201ENST00000602916 267 ntBASIC3.06□□□□□ -1.92
HCFC2Q9Y5Z7 AL670379.2-201ENST00000604983 252 ntBASIC3.06□□□□□ -1.92
HCFC2Q9Y5Z7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HCFC2Q9Y5Z7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HCFC2Q9Y5Z7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 U8.7-201ENST00000364940 136 ntBASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 MIR184-201ENST00000384962 84 ntBASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 MIR1283-1-201ENST00000408494 87 ntBASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 TRBV12-1-201ENST00000479785 344 ntBASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 RNU5F-4P-201ENST00000516581 114 ntBASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 RNU7-116P-201ENST00000516940 62 ntBASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 RMST_8.1-201ENST00000610287 165 ntBASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HCFC2Q9Y5Z7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 CENPCP1-201ENST00000533085 2578 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 SNORA27.1-201ENST00000362604 124 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 Y_RNA.261-201ENST00000364631 102 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 RNU6-407P-201ENST00000365280 104 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 Y_RNA.393-201ENST00000383936 102 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 SNORD20-201ENST00000384550 80 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 Y_RNA.563-201ENST00000384707 108 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 MIR196B-201ENST00000384852 84 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 MIR504-201ENST00000385065 83 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 MT-TT-201ENST00000387460 66 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 AL355796.1-201ENST00000406706 323 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 MIR1278-201ENST00000408753 81 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 SNORA36B-201ENST00000410438 131 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 RPS27P1-201ENST00000450552 247 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 EEF1B2P7-201ENST00000451177 676 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 RNU6-221P-201ENST00000459541 99 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 AC010598.1-201ENST00000510378 103 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 RNA5SP112-201ENST00000515937 99 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 AC093331.1-201ENST00000521474 169 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 RPL30P11-203ENST00000598995 310 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 AC006435.5-201ENST00000624486 112 ntBASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HCFC2Q9Y5Z7 AC110774.1-201ENST00000623567 2018 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 RNU6-674P-201ENST00000363831 107 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 SNORA20B-201ENST00000384220 132 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 Y_RNA.542-201ENST00000384641 111 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 SNORD37.2-201ENST00000391075 66 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 RNA5SP496-201ENST00000391240 109 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 HSPE1P21-201ENST00000438283 308 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 RPS26P55-201ENST00000471178 356 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 RNU6-1337P-201ENST00000516525 95 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 AC104027.1-201ENST00000521887 300 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 AC091544.4-201ENST00000555268 342 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 AC127455.1-201ENST00000565496 145 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 AC103810.1-201ENST00000579873 453 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 snoZ196.1-201ENST00000625269 89 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 AL021368.2-201ENST00000606125 5352 ntBASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HCFC2Q9Y5Z7 AP006437.1-201ENST00000641440 3685 ntBASIC3.03□□□□□ -1.93
HCFC2Q9Y5Z7 Z82209.1-201ENST00000422141 2135 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 Y_RNA.124-201ENST00000363339 93 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 RNU6-597P-201ENST00000365620 102 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 RNU6-975P-201ENST00000384296 105 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 MIR518C-201ENST00000384822 101 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 AC010154.1-201ENST00000425857 269 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 RNU7-57P-201ENST00000459540 60 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 AC092991.1-201ENST00000477176 376 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 AC117454.1-201ENST00000491120 168 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 RNA5SP217-201ENST00000515959 91 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 RNU6-919P-201ENST00000516731 104 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 AC018630.3-201ENST00000542637 96 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 MIR4753-201ENST00000585119 83 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 MIR6844-201ENST00000637122 62 ntBASIC3.02□□□□□ -1.93
HCFC2Q9Y5Z7 AC068647.2-201ENST00000637380 353 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms