Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 MRPS10P1-201ENST00000448483 130 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 SNORA70.12-201ENST00000516084 153 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-1023P-201ENST00000516137 106 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 RNA5SP137-201ENST00000516833 135 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 MIR3126-201ENST00000577443 74 ntBASIC2.52□□□□□ -2.01
PCDHA3Q9Y5H8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 SNORA25.1-201ENST00000362326 128 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 RNU1-51P-201ENST00000365345 176 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 SNORA20B-201ENST00000384220 132 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 Y_RNA.476-201ENST00000384347 108 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 MIR29C-201ENST00000385231 88 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 MIR873-201ENST00000401120 77 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-710P-201ENST00000410424 105 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 RNU2-61P-201ENST00000411069 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 AL353689.1-201ENST00000438895 199 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 Y_RNA.680-201ENST00000516441 93 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 SNORA27.4-201ENST00000516650 95 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 RNU1-104P-201ENST00000517280 175 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 SUMO2P18-201ENST00000518873 252 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 MIR3162-201ENST00000581818 82 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 MIR3128-201ENST00000581957 66 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 DEFB117-201ENST00000602356 141 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.15-201ENST00000611544 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.16-201ENST00000613119 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.12-201ENST00000613778 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.20-201ENST00000613956 192 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.9-201ENST00000615427 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.14-201ENST00000615943 113 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.11-201ENST00000616345 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.2-201ENST00000616535 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.3-201ENST00000617785 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.19-201ENST00000618602 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 RNU2-1-201ENST00000618664 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.6-201ENST00000619225 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.5-201ENST00000619465 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 U2.10-201ENST00000620268 191 ntBASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
PCDHA3Q9Y5H8 AL136360.1-201ENST00000503377 1900 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 UBE2WP1-201ENST00000362030 340 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 Y_RNA.20-201ENST00000362479 113 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 SNORA27.1-201ENST00000362604 124 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-271P-201ENST00000363858 105 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 SNORD114-6-201ENST00000364393 72 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-514P-201ENST00000384208 107 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 SNORA11.2-201ENST00000408318 127 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 AC060773.1-201ENST00000421698 310 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 MIR4672-201ENST00000583126 81 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 MIR1291-201ENST00000627649 87 ntBASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHA3Q9Y5H8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 Y_RNA.44-201ENST00000362676 108 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-1164P-201ENST00000364428 107 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 RNU1-91P-201ENST00000364746 163 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 SNORA67.1-201ENST00000364749 141 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 SNORD58.1-201ENST00000391313 66 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 AL603910.2-201ENST00000407268 136 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 AL121890.1-201ENST00000435457 205 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 AL513328.1-201ENST00000446460 224 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 RPL23AP7-203ENST00000449021 469 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 AL109933.2-201ENST00000452651 260 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 AC091959.1-201ENST00000495857 238 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-191P-201ENST00000516295 94 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 MIR3145-201ENST00000580727 82 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 AL512605.2-201ENST00000592972 256 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PCDHA3Q9Y5H8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 RNU4-80P-201ENST00000363200 141 ntBASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-379P-201ENST00000363813 104 ntBASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 SNORA20.1-201ENST00000364790 130 ntBASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 SNORA40.19-201ENST00000390846 128 ntBASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 AC108938.1-201ENST00000451204 136 ntBASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 RN7SL636P-201ENST00000497504 294 ntBASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 AC011406.1-201ENST00000512440 370 ntBASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 RNU6-1146P-201ENST00000516282 102 ntBASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 BX284668.6-201ENST00000606899 438 ntBASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 AC022202.1-201ENST00000613515 211 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms