Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 MIR3145-201ENST00000580727 82 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 SNORD11B-201ENST00000607707 90 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 AL008718.3-201ENST00000610217 321 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 AC005562.2-201ENST00000618264 111 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.121-201ENST00000363309 113 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 U3.9-201ENST00000363823 204 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 RNU6-81P-201ENST00000365608 104 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.571-201ENST00000384753 98 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 MIR181B1-201ENST00000385240 110 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 FO393413.1-201ENST00000402892 195 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 AL606753.1-201ENST00000427435 87 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 HMGN2P3-201ENST00000433603 273 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 HMGN2P5-201ENST00000436882 273 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 AL445687.1-201ENST00000439946 251 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 RNU6-436P-201ENST00000516171 114 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 MTND5P41-201ENST00000517498 206 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 AC009127.3-201ENST00000570531 403 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 AC068205.3-201ENST00000636385 468 ntBASIC3.07□□□□□ -1.92
PTPN22Q9Y2R2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 RNU6-727P-201ENST00000363592 107 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 RNU6-454P-201ENST00000364292 107 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 RNU6-312P-201ENST00000364629 107 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.398-201ENST00000383952 99 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.415-201ENST00000384012 112 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 U3.40-201ENST00000408706 208 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 AC005840.1-201ENST00000498412 377 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 SNORA31.26-201ENST00000517250 137 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 RPL17P51-201ENST00000605218 238 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 AC004832.4-201ENST00000608952 331 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 MTND1P7-201ENST00000632801 297 ntBASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN22Q9Y2R2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.7-201ENST00000362352 102 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.8-201ENST00000362353 102 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.329-201ENST00000365209 107 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 MIR181A2-201ENST00000384863 110 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 AC004866.1-201ENST00000411748 78 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 BTF3P11-201ENST00000426582 477 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 TOMM22P2-201ENST00000430735 237 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.637-201ENST00000459424 114 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 RNU6-56P-201ENST00000516986 93 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 AP001485.1-201ENST00000604799 199 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 MIR7111-201ENST00000619751 72 ntBASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.23-201ENST00000362496 106 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.75-201ENST00000362927 97 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 RNA5SP504-201ENST00000410676 117 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 RNU5E-9P-201ENST00000411164 104 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 RPS29P6-201ENST00000438196 145 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 AC004386.2-201ENST00000441858 148 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 HMGB3P3-201ENST00000510526 400 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 RNU6-346P-201ENST00000516288 111 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 RNU6-586P-201ENST00000517265 104 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 AC104465.1-201ENST00000611365 139 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 AC008873.1-201ENST00000625051 138 ntBASIC3.04□□□□□ -1.92
PTPN22Q9Y2R2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 snoU2_19.1-201ENST00000362361 80 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 SNORD115-30-201ENST00000364117 82 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 SNORD114-30-201ENST00000364448 72 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.243-201ENST00000364481 109 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.272-201ENST00000364696 102 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.361-201ENST00000365515 120 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 RNU4-17P-201ENST00000365598 141 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 SNORA67.2-201ENST00000384300 149 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 AC145146.1-201ENST00000496370 254 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 RNA5SP458-201ENST00000516188 119 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 AC136628.3-201ENST00000521868 290 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms