Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 Y_RNA.673-201ENST00000516306 88 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 MIR1273D-201ENST00000577266 86 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 AL109918.3-201ENST00000603072 338 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 AC103810.6-201ENST00000606708 136 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 AL449363.1-201ENST00000617815 186 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 AC007336.1-201ENST00000576365 3828 ntBASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
SSX2IPQ9Y2D8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 Y_RNA.257-201ENST00000364596 102 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 SNORD31B-201ENST00000364977 69 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 RNU1-52P-201ENST00000384190 164 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 RNU6-220P-201ENST00000390919 107 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 AL603910.2-201ENST00000407268 136 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 MIR1283-1-201ENST00000408494 87 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 AC074290.1-201ENST00000448883 135 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 AC114982.1-201ENST00000469402 321 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 SNORA48.11-201ENST00000517015 89 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 AC022616.8-201ENST00000533569 253 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 AP002001.1-203ENST00000534002 267 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 MIR4753-201ENST00000585119 83 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 BX284668.6-201ENST00000606899 438 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 AC141273.2-201ENST00000618989 130 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SSX2IPQ9Y2D8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 SNORA25.1-201ENST00000362326 128 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 Y_RNA.136-201ENST00000363444 102 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 Y_RNA.383-201ENST00000383855 97 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 RNU6-514P-201ENST00000384208 107 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 RNU2-32P-201ENST00000411193 191 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 AL139109.1-201ENST00000455491 297 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 HMGN2P9-201ENST00000476875 229 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 RNU6-155P-201ENST00000516347 100 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 AL355297.2-201ENST00000604792 129 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 AL137847.3-201ENST00000611521 109 ntBASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SSX2IPQ9Y2D8 RNU6-545P-201ENST00000362681 104 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 RNU6-1266P-201ENST00000362794 105 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 SNORD27-201ENST00000363981 72 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 Y_RNA.515-201ENST00000384535 112 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 RNU6-1072P-201ENST00000384703 107 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 RNU6-443P-201ENST00000384780 107 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 MIR561-201ENST00000385216 97 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 MIR548B-201ENST00000385247 97 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 AC003685.2-201ENST00000422795 395 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 RNU2-12P-201ENST00000517216 168 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 MIR3684-201ENST00000579779 74 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 U2.14-201ENST00000615943 113 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 AC078938.1-201ENST00000620993 318 ntBASIC2.55□□□□□ -2
SSX2IPQ9Y2D8 Y_RNA.44-201ENST00000362676 108 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 Y_RNA.54-201ENST00000362766 105 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 RNU6-438P-201ENST00000365561 103 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 SNORA6-201ENST00000384033 151 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 AL357139.1-201ENST00000407792 426 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 RNU6-1199P-201ENST00000411249 104 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 RPL23AP3-201ENST00000453844 468 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 ATP5EP1-201ENST00000510257 156 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 AC026436.1-201ENST00000510537 270 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 RNA5SP281-201ENST00000516504 135 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 RNU6-965P-201ENST00000516721 96 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 AC009127.3-201ENST00000570531 403 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 MIR6840-201ENST00000611937 71 ntBASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSX2IPQ9Y2D8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 RNU6-454P-201ENST00000364292 107 ntBASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 SNORD58.1-201ENST00000391313 66 ntBASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 RNU7-26P-201ENST00000458980 63 ntBASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 RNU6-111P-201ENST00000517179 105 ntBASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 AC010900.2-201ENST00000604508 210 ntBASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.53□□□□□ -2
SSX2IPQ9Y2D8 MIR1248-201ENST00000629190 106 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms