Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL121890.5-201ENST00000620848 304 ntBASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 AC110079.1-202ENST00000635213 138 ntBASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 DYNLT3P1-201ENST00000378574 347 ntBASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 RNU2-55P-201ENST00000411146 174 ntBASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 ATP5EP1-201ENST00000510257 156 ntBASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 AC015720.1-201ENST00000565251 277 ntBASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 RPL23AP91-201ENST00000569211 455 ntBASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 AC131055.1-201ENST00000584626 316 ntBASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 AL021707.8-201ENST00000609428 183 ntBASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.14□□□□□ -1.75
ZC3H4Q9UPT8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 MRPS36P2-201ENST00000512569 299 ntBASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 Y_RNA.690-201ENST00000516603 95 ntBASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 RN7SKP209-201ENST00000516888 304 ntBASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 AC109329.2-201ENST00000519658 482 ntBASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 AL929325.1-201ENST00000603096 117 ntBASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 UCA1.1-201ENST00000620952 75 ntBASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 AL137790.1-201ENST00000634283 177 ntBASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.13□□□□□ -1.75
ZC3H4Q9UPT8 AC000403.1-201ENST00000613696 3585 ntBASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 MAPK10-322ENST00000641485 4530 ntBASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 Y_RNA.91-201ENST00000363042 107 ntBASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 RNU6-944P-201ENST00000364023 107 ntBASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 RNU6-418P-201ENST00000384035 107 ntBASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 SNORD116-21-201ENST00000384507 92 ntBASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 RNU6-1274P-201ENST00000384557 107 ntBASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 RNA5SP112-201ENST00000515937 99 ntBASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 RNA5SP356-201ENST00000515972 94 ntBASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZC3H4Q9UPT8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 RNU6-438P-201ENST00000365561 103 ntBASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 SNORA72-201ENST00000384339 132 ntBASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 RNU6-237P-201ENST00000515985 71 ntBASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 RMST_8.1-201ENST00000610287 165 ntBASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
ZC3H4Q9UPT8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 AC008134.1-201ENST00000420943 193 ntBASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 AC010531.2-201ENST00000465012 153 ntBASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 RNU6-948P-201ENST00000516374 107 ntBASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 RNVU1-4-201ENST00000612985 164 ntBASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 uc_338.4-201ENST00000616635 176 ntBASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 MIR4679-1-201ENST00000637619 75 ntBASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 AL353746.1-201ENST00000566293 6881 ntBASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ZC3H4Q9UPT8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 Y_RNA.203-201ENST00000364106 102 ntBASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 SNORD58C-201ENST00000365223 64 ntBASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 AC063976.4-201ENST00000421971 163 ntBASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 AC025647.1-201ENST00000517879 253 ntBASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 AL160236.1-201ENST00000556317 195 ntBASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 MIR2681-201ENST00000581814 105 ntBASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 AC105245.1-201ENST00000581934 244 ntBASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 AC006254.2-201ENST00000603259 279 ntBASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZC3H4Q9UPT8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
ZC3H4Q9UPT8 LINC02471-203ENST00000641941 4752 ntBASIC4.09□□□□□ -1.76
ZC3H4Q9UPT8 AC008555.8-201ENST00000623602 2168 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 AC093908.1-201ENST00000623125 8092 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 Y_RNA.35-201ENST00000362601 101 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-647P-201ENST00000364243 107 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 Y_RNA.280-201ENST00000364765 112 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms