Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RNA5SP374-201ENST00000362939 125 ntBASIC4.88□□□□□ -1.63
PHF8Q9UPP1 HMGN2P16-201ENST00000456802 261 ntBASIC4.88□□□□□ -1.63
PHF8Q9UPP1 RPL23AP94-201ENST00000512518 302 ntBASIC4.88□□□□□ -1.63
PHF8Q9UPP1 SUMO2P16-201ENST00000519475 264 ntBASIC4.88□□□□□ -1.63
PHF8Q9UPP1 AC103810.1-201ENST00000579873 453 ntBASIC4.88□□□□□ -1.63
PHF8Q9UPP1 MIR4325-201ENST00000583049 90 ntBASIC4.88□□□□□ -1.63
PHF8Q9UPP1 AC090115.4-201ENST00000609970 188 ntBASIC4.88□□□□□ -1.63
PHF8Q9UPP1 MIR376A2-201ENST00000636782 80 ntBASIC4.88□□□□□ -1.63
PHF8Q9UPP1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PHF8Q9UPP1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PHF8Q9UPP1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PHF8Q9UPP1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PHF8Q9UPP1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PHF8Q9UPP1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PHF8Q9UPP1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PHF8Q9UPP1 ZNF720P1-201ENST00000562403 1939 ntBASIC4.87□□□□□ -1.63
PHF8Q9UPP1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.87□□□□□ -1.63
PHF8Q9UPP1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PHF8Q9UPP1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHF8Q9UPP1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PHF8Q9UPP1 RNY3P2-201ENST00000362918 102 ntBASIC4.87□□□□□ -1.63
PHF8Q9UPP1 RNY1P1-201ENST00000364372 112 ntBASIC4.87□□□□□ -1.63
PHF8Q9UPP1 Y_RNA.253-201ENST00000364562 112 ntBASIC4.87□□□□□ -1.63
PHF8Q9UPP1 SNORA2.2-201ENST00000365473 135 ntBASIC4.87□□□□□ -1.63
PHF8Q9UPP1 U8.17-201ENST00000391292 132 ntBASIC4.87□□□□□ -1.63
PHF8Q9UPP1 MIR1255A-201ENST00000408338 113 ntBASIC4.87□□□□□ -1.63
PHF8Q9UPP1 SNRPGP5-201ENST00000456003 220 ntBASIC4.87□□□□□ -1.63
PHF8Q9UPP1 RN7SL504P-201ENST00000494496 287 ntBASIC4.87□□□□□ -1.63
PHF8Q9UPP1 IGKV2-26-201ENST00000518305 343 ntBASIC4.87□□□□□ -1.63
PHF8Q9UPP1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHF8Q9UPP1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.87□□□□□ -1.63
PHF8Q9UPP1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
PHF8Q9UPP1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.86□□□□□ -1.63
PHF8Q9UPP1 RNU6-944P-201ENST00000364023 107 ntBASIC4.86□□□□□ -1.63
PHF8Q9UPP1 RNA5SP104-201ENST00000410989 118 ntBASIC4.86□□□□□ -1.63
PHF8Q9UPP1 AC022137.1-201ENST00000483735 151 ntBASIC4.86□□□□□ -1.63
PHF8Q9UPP1 RNU7-70P-201ENST00000516941 66 ntBASIC4.86□□□□□ -1.63
PHF8Q9UPP1 AL359075.3-201ENST00000613288 217 ntBASIC4.86□□□□□ -1.63
PHF8Q9UPP1 IGLL4P-201ENST00000614590 133 ntBASIC4.86□□□□□ -1.63
PHF8Q9UPP1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.86□□□□□ -1.63
PHF8Q9UPP1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.86□□□□□ -1.63
PHF8Q9UPP1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PHF8Q9UPP1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHF8Q9UPP1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHF8Q9UPP1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHF8Q9UPP1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHF8Q9UPP1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.85□□□□□ -1.63
PHF8Q9UPP1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.85□□□□□ -1.63
PHF8Q9UPP1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.85□□□□□ -1.63
PHF8Q9UPP1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PHF8Q9UPP1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHF8Q9UPP1 Y_RNA.10-201ENST00000362371 110 ntBASIC4.85□□□□□ -1.63
PHF8Q9UPP1 RNU6-242P-201ENST00000384359 107 ntBASIC4.85□□□□□ -1.63
PHF8Q9UPP1 RNU6-1274P-201ENST00000384557 107 ntBASIC4.85□□□□□ -1.63
PHF8Q9UPP1 Y_RNA.601-201ENST00000410500 113 ntBASIC4.85□□□□□ -1.63
PHF8Q9UPP1 RPL39P39-201ENST00000455840 151 ntBASIC4.85□□□□□ -1.63
PHF8Q9UPP1 RNU7-164P-201ENST00000459221 62 ntBASIC4.85□□□□□ -1.63
PHF8Q9UPP1 EIF4BP1-201ENST00000554881 351 ntBASIC4.85□□□□□ -1.63
PHF8Q9UPP1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.85□□□□□ -1.63
PHF8Q9UPP1 MIR5680-201ENST00000577577 84 ntBASIC4.85□□□□□ -1.63
PHF8Q9UPP1 MIR4513-201ENST00000581077 86 ntBASIC4.85□□□□□ -1.63
PHF8Q9UPP1 AP003355.3-201ENST00000623465 114 ntBASIC4.85□□□□□ -1.63
PHF8Q9UPP1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
PHF8Q9UPP1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PHF8Q9UPP1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHF8Q9UPP1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHF8Q9UPP1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHF8Q9UPP1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHF8Q9UPP1 RNU6-1189P-201ENST00000383958 107 ntBASIC4.84□□□□□ -1.63
PHF8Q9UPP1 RNY1P6-201ENST00000384193 109 ntBASIC4.84□□□□□ -1.63
PHF8Q9UPP1 MIR1253-201ENST00000408273 105 ntBASIC4.84□□□□□ -1.63
PHF8Q9UPP1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.84□□□□□ -1.63
PHF8Q9UPP1 RNA5SP112-201ENST00000515937 99 ntBASIC4.84□□□□□ -1.63
PHF8Q9UPP1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.84□□□□□ -1.63
PHF8Q9UPP1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PHF8Q9UPP1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PHF8Q9UPP1 uc_338.32-201ENST00000615087 172 ntBASIC4.84□□□□□ -1.63
PHF8Q9UPP1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PHF8Q9UPP1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PHF8Q9UPP1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHF8Q9UPP1 LINC02471-203ENST00000641941 4752 ntBASIC4.84□□□□□ -1.64
PHF8Q9UPP1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 Y_RNA.500-201ENST00000384466 111 ntBASIC4.83□□□□□ -1.64
PHF8Q9UPP1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 RNU6-816P-201ENST00000390914 107 ntBASIC4.83□□□□□ -1.64
PHF8Q9UPP1 RNU6-1268P-201ENST00000391214 107 ntBASIC4.83□□□□□ -1.64
PHF8Q9UPP1 RNU6-1239P-201ENST00000391310 107 ntBASIC4.83□□□□□ -1.64
PHF8Q9UPP1 RPL23AP67-201ENST00000465341 474 ntBASIC4.83□□□□□ -1.64
PHF8Q9UPP1 MIR4765-201ENST00000585007 77 ntBASIC4.83□□□□□ -1.64
PHF8Q9UPP1 FAM71BP1-201ENST00000604431 523 ntBASIC4.83□□□□□ -1.64
PHF8Q9UPP1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms