Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 RNA5SP467-201ENST00000391274 118 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 SNORA75.4-201ENST00000391278 119 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 MIR1253-201ENST00000408273 105 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 MIR1267-201ENST00000408723 78 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 MTCYBP10-201ENST00000424905 650 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 JTBP1-201ENST00000441314 247 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 HSPE1P24-201ENST00000450782 238 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 RPL31P58-201ENST00000469001 379 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 SNORA20.3-201ENST00000516880 132 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 AC091144.1-201ENST00000519573 138 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 AC093023.1-201ENST00000547375 507 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 FRG2DP-202ENST00000566967 323 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 AC005668.1-201ENST00000571142 476 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 AC090617.3-201ENST00000573670 475 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 AC005899.2-201ENST00000584353 90 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 TPTEP1-208ENST00000636884 213 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 MIR302D-201ENST00000362275 68 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 Y_RNA.122-201ENST00000363331 96 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 RNU6-700P-201ENST00000391043 107 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 AC138393.2-201ENST00000414742 246 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 AL353997.1-201ENST00000432936 108 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 MTND4P18-201ENST00000447010 465 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 AC245517.4-201ENST00000448601 281 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 RPS29P23-201ENST00000458635 123 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 MTND4P17-201ENST00000470444 350 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 RPS26P45-201ENST00000471748 340 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 HMGN1P7-201ENST00000491722 313 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 AC093852.1-201ENST00000503587 266 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 SCARNA16.2-201ENST00000516520 172 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 RNU7-128P-201ENST00000517247 62 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 AC099654.14-201ENST00000638599 341 ntBASIC1.26□□□□□ -2.21
UBQLN1Q9UMX0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AC100821.1-201ENST00000523153 2479 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AL161722.3-201ENST00000605789 2983 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 RNU6-271P-201ENST00000363858 105 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 SNORA4.2-201ENST00000365313 147 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 RNU6-1145P-201ENST00000384246 107 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 Y_RNA.474-201ENST00000384341 102 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 Y_RNA.557-201ENST00000384680 107 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 MIR194-1-201ENST00000384892 85 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 RNU1-78P-201ENST00000391248 165 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 RNU6-1001P-201ENST00000411265 100 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 FTH1P12-201ENST00000432137 551 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AC073910.1-201ENST00000445047 438 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 RPS27P1-201ENST00000450552 247 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 U8.22-201ENST00000459141 133 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AL163195.1-201ENST00000496941 348 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 HMGN1P12-201ENST00000499125 195 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AC090821.2-201ENST00000523552 176 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AC022432.1-201ENST00000595739 310 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 PISRT1.1-201ENST00000616930 107 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AC095038.3-201ENST00000634439 195 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 AL669831.3-213ENST00000636676 183 ntBASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
UBQLN1Q9UMX0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 Y_RNA.390-201ENST00000383932 102 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 ELOCP21-201ENST00000412558 336 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 TOMM22P2-201ENST00000430735 237 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 Y_RNA.635-201ENST00000459041 101 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 snoU13.27-201ENST00000459278 104 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 RPL17P19-201ENST00000489069 552 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 PRDX4P1-201ENST00000507189 574 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 RNU6-307P-201ENST00000516743 106 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 RNU6-1213P-201ENST00000517075 94 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 CYCSP23-201ENST00000519781 313 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 AL357075.2-201ENST00000614906 189 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 U6.73-201ENST00000619194 103 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 AC092794.2-201ENST00000620933 563 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 MIR8063-201ENST00000621930 81 ntBASIC1.24□□□□□ -2.21
UBQLN1Q9UMX0 Y_RNA.116-201ENST00000363292 103 ntBASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 RNU6-1188P-201ENST00000363795 107 ntBASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 RNA5SP323-201ENST00000391094 133 ntBASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 AL606517.2-201ENST00000442855 241 ntBASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 RNA5SP445-201ENST00000515889 115 ntBASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 AC004584.2-201ENST00000570407 410 ntBASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 AL359075.3-201ENST00000613288 217 ntBASIC1.23□□□□□ -2.21
UBQLN1Q9UMX0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms