Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 Y_RNA.570-201ENST00000384750 101 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 MT-TW-201ENST00000387382 68 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 MIR1289-2-201ENST00000408360 111 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 Y_RNA.602-201ENST00000410535 92 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.09□□□□□ -2.07
SIX4Q9UIU6 AC016925.1-201ENST00000458303 298 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 RNU6-1143P-201ENST00000516125 104 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.09□□□□□ -2.07
SIX4Q9UIU6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.09□□□□□ -2.07
SIX4Q9UIU6 AL161670.1-201ENST00000554348 137 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.09□□□□□ -2.07
SIX4Q9UIU6 MIR3149-201ENST00000584629 83 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 AC002984.1-201ENST00000591692 448 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 U4atac.1-201ENST00000618345 95 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 AC091932.3-201ENST00000624223 323 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.09□□□□□ -2.07
SIX4Q9UIU6 AP000553.5-201ENST00000641933 54 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 AC009487.4-201ENST00000624969 3585 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.101-201ENST00000363154 102 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 SNORD113-8-201ENST00000363497 74 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.193-201ENST00000363979 102 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.286-201ENST00000364813 102 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.452-201ENST00000384202 108 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.462-201ENST00000384268 102 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 MIR1302-3-201ENST00000408128 138 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 RPL23AP3-201ENST00000453844 468 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.08□□□□□ -2.08
SIX4Q9UIU6 AC025754.2-201ENST00000606491 432 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 SNORD14A-201ENST00000606526 91 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 MIR3674-201ENST00000636576 68 ntBASIC2.08□□□□□ -2.08
SIX4Q9UIU6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.84-201ENST00000363011 104 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 U3.8-201ENST00000363675 217 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 RNU6-1175P-201ENST00000365200 107 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 MIR300-201ENST00000401138 83 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 AL357139.1-201ENST00000407792 426 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.07□□□□□ -2.08
SIX4Q9UIU6 AC009238.1-201ENST00000442165 424 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 AC009237.6-201ENST00000446969 424 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 AC016717.1-201ENST00000448918 286 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.07□□□□□ -2.08
SIX4Q9UIU6 SNORA4.4-201ENST00000515921 135 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 RNU7-110P-201ENST00000516891 62 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 MIR4753-201ENST00000585119 83 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 AC004467.1-201ENST00000615678 330 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 U4.1-201ENST00000620349 87 ntBASIC2.07□□□□□ -2.08
SIX4Q9UIU6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SIX4Q9UIU6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SIX4Q9UIU6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SIX4Q9UIU6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SIX4Q9UIU6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 MIR410-201ENST00000362222 80 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 RNU6-454P-201ENST00000364292 107 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.230-201ENST00000364348 109 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 SNORA72.2-201ENST00000365028 127 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 RNU6-438P-201ENST00000365561 103 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.541-201ENST00000384640 113 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 U8.13-201ENST00000390842 128 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.581-201ENST00000391017 97 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 AC003989.2-201ENST00000440224 169 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 HSPE1P25-201ENST00000455484 251 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 AC093259.1-201ENST00000509755 300 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 RNU6-496P-201ENST00000516145 99 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 AC110588.1-201ENST00000559699 137 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.06□□□□□ -2.08
SIX4Q9UIU6 AC078899.2-201ENST00000595282 212 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 AP000942.4-201ENST00000604811 241 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 AC011373.1-201ENST00000607270 237 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.06□□□□□ -2.08
SIX4Q9UIU6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.06□□□□□ -2.08
SIX4Q9UIU6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SIX4Q9UIU6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SIX4Q9UIU6 AL356292.1-201ENST00000283110 373 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 MIR340-201ENST00000362125 95 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.16-201ENST00000362421 102 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 RNU6-702P-201ENST00000364982 107 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 RNU6-418P-201ENST00000384035 107 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 SNORD14D-201ENST00000384390 87 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 MIR1302-6-201ENST00000408466 90 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 RNU6-1203P-201ENST00000410703 110 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 RNU5A-5P-201ENST00000411054 116 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 RNU6-1199P-201ENST00000411249 104 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 TOMM22P2-201ENST00000430735 237 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
SIX4Q9UIU6 NDUFB4P10-201ENST00000452541 359 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 AL137159.1-201ENST00000452808 512 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 PRELID3BP1-201ENST00000457142 540 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 RNU7-57P-201ENST00000459540 60 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 AC010531.2-201ENST00000465012 153 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 TRBVB-201ENST00000477100 408 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 HMGB3P17-201ENST00000504195 649 ntBASIC2.05□□□□□ -2.08
SIX4Q9UIU6 Y_RNA.668-201ENST00000516233 93 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms