Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ZNF519P2-201ENST00000557032 169 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AP000907.4-201ENST00000604143 237 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AL513423.1-201ENST00000621695 132 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AC006435.5-201ENST00000624486 112 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.49□□□□□ -2.33
CCDC88CQ9P219 MIR924-201ENST00000638017 53 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 AL442644.1-201ENST00000454390 3105 ntBASIC0.49□□□□□ -2.33
CCDC88CQ9P219 RNU6-873P-201ENST00000363833 107 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.256-201ENST00000364594 104 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 SNORD114-24-201ENST00000365029 72 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 RNU6-877P-201ENST00000383868 107 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 RNU5A-6P-201ENST00000384136 116 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 MIR548B-201ENST00000385247 97 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 RPL30P16-201ENST00000419341 429 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AL358176.2-201ENST00000425769 204 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.48□□□□□ -2.33
CCDC88CQ9P219 DAP3P1-201ENST00000441522 278 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC079354.2-201ENST00000453523 154 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 C1DP4-201ENST00000455429 424 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC88CQ9P219 RNU6-612P-201ENST00000516909 102 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC025423.5-201ENST00000550230 219 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC027288.2-201ENST00000553028 243 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 PIGPP4-201ENST00000584447 307 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC008133.2-201ENST00000624540 351 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
CCDC88CQ9P219 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC88CQ9P219 SNORD87-201ENST00000364849 89 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.373-201ENST00000365600 103 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.473-201ENST00000384333 102 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 RNU4-55P-201ENST00000410731 137 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC243428.1-201ENST00000421099 264 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AL359672.1-201ENST00000442302 409 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC88CQ9P219 MIR4742-201ENST00000581069 85 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC012557.2-201ENST00000605919 418 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AP001330.5-201ENST00000607176 411 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 AC007684.1-201ENST00000609671 477 ntBASIC0.48□□□□□ -2.33
CCDC88CQ9P219 RNU6-1305P-201ENST00000364353 104 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.358-201ENST00000365491 99 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 RNU6-483P-201ENST00000384088 108 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 RNA5SP323-201ENST00000391094 133 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AL451046.2-201ENST00000403074 277 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 DLGAP5P1-201ENST00000430307 464 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AL353572.1-201ENST00000442490 417 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC010469.2-201ENST00000496412 480 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 MTCO2P30-201ENST00000503662 364 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC105758.1-201ENST00000506038 399 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 SNORA31.2-201ENST00000516019 134 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 RNU6-1278P-201ENST00000516130 107 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC245505.1-201ENST00000556398 224 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC015688.6-201ENST00000577737 104 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC010525.2-201ENST00000590920 195 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AL121757.2-201ENST00000611223 313 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.47□□□□□ -2.33
CCDC88CQ9P219 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC091925.1-201ENST00000623204 462 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AP000770.2-201ENST00000623694 100 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.100-201ENST00000363141 102 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 RNU6-137P-201ENST00000363680 108 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.179-201ENST00000363844 90 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.231-201ENST00000364358 102 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 EIF4E2P1-201ENST00000393781 255 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 MIR1185-2-201ENST00000408687 86 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 RN7SKP200-201ENST00000410564 320 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 RNU2-64P-201ENST00000411315 191 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC063976.4-201ENST00000421971 163 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 MTCO1P20-201ENST00000425366 358 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC88CQ9P219 LINC01399-202ENST00000458450 244 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 snoU13.25-201ENST00000458945 104 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC091021.1-201ENST00000468051 388 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC091885.1-201ENST00000506658 268 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 RN7SKP298-201ENST00000515950 94 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 RNU6-430P-201ENST00000517078 107 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC136628.3-201ENST00000521868 290 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AK6P2-201ENST00000549020 471 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC090049.2-201ENST00000550377 109 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AL512360.1-201ENST00000555346 234 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 MTND1P15-201ENST00000579262 949 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 Z83818.1-201ENST00000603584 150 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC121247.2-201ENST00000604776 136 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC103591.3-201ENST00000608684 209 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC109347.2-201ENST00000610220 349 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC007742.2-201ENST00000618226 398 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
CCDC88CQ9P219 RNU6-199P-201ENST00000362954 107 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.123-201ENST00000363338 102 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 RNU6-281P-201ENST00000384212 103 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms