Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 RPS27P22-201ENST00000478056 241 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 RPS29P11-201ENST00000496507 171 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 SNORA20.3-201ENST00000516880 132 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 RNU6-295P-201ENST00000516901 104 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 AC022217.4-201ENST00000604389 163 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 AC113139.1-201ENST00000605049 239 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 SNORA28-201ENST00000606769 126 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 MIR6715A-201ENST00000615929 79 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 AC018630.2-201ENST00000534866 2403 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 RNU6-203P-201ENST00000384038 104 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 Y_RNA.498-201ENST00000384460 102 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 RNU6-939P-201ENST00000384634 107 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 RNU6-331P-201ENST00000384724 107 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 MIR513A1-201ENST00000385138 129 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 RNA5SP109-201ENST00000391010 116 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 snoU13.23-201ENST00000458863 104 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 MIR2053-201ENST00000459295 91 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 AC097462.1-201ENST00000514125 324 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 AC018448.1-201ENST00000552843 316 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 RPL21P9-201ENST00000556149 474 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 MIR3937-201ENST00000580135 106 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 AC040896.1-201ENST00000613819 479 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 MIR8054-201ENST00000620877 86 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 AL513423.1-201ENST00000621695 132 ntBASIC1.48□□□□□ -2.17
CHCHD3Q9NX63 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 RNU6-874P-201ENST00000362390 105 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 RNU6-1188P-201ENST00000363795 107 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 Y_RNA.358-201ENST00000365491 99 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 MRPL35P1-201ENST00000404272 572 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 RNU6-370P-201ENST00000411008 104 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 AC114482.1-201ENST00000418010 247 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 SNX2P2-201ENST00000424553 323 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 AC003989.2-201ENST00000440224 169 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 RNU6-625P-201ENST00000459412 107 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 AC010469.2-201ENST00000496412 480 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 AC022868.1-201ENST00000517767 391 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 AL442163.3-201ENST00000554110 156 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 AC016727.1-205ENST00000605437 569 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 MIR7843-201ENST00000622274 79 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CHCHD3Q9NX63 SNORA69.1-201ENST00000390904 137 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 RBMX2P4-201ENST00000441256 376 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 RPL30P7-201ENST00000479312 323 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 AC099513.1-201ENST00000490423 301 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 RNU6-1278P-201ENST00000516130 107 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 RNU7-28P-201ENST00000516759 62 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 AC144568.1-201ENST00000520139 137 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 AL929325.1-201ENST00000603096 117 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 MIR502-201ENST00000606349 86 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 AC005828.6-201ENST00000606610 232 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 AC021506.2-201ENST00000612354 169 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 MIR3674-201ENST00000636576 68 ntBASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CHCHD3Q9NX63 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 ZNF72P-201ENST00000425869 1908 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 RNA5SP361-201ENST00000362686 118 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 RNU1-22P-201ENST00000363334 158 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 SNORA20B-201ENST00000384220 132 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 MIR9-3-201ENST00000385084 90 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 MIR320A-201ENST00000385302 82 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 U8.13-201ENST00000390842 128 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 RNU6-440P-201ENST00000390882 105 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 RNA5SP475-201ENST00000410568 110 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 RN7SKP101-201ENST00000411376 320 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 AC138393.2-201ENST00000414742 246 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 MTND4P28-201ENST00000426217 387 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 RAB28P5-201ENST00000427490 651 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 SNORA40.9-201ENST00000515895 93 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 Y_RNA.675-201ENST00000516389 149 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 AC110588.1-201ENST00000559699 137 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 AL390123.1-201ENST00000603216 237 ntBASIC1.45□□□□□ -2.18
CHCHD3Q9NX63 SNORA27.1-201ENST00000362604 124 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 RNU6-1301P-201ENST00000362724 104 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 RNU6-318P-201ENST00000384283 103 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 RNU6-482P-201ENST00000391068 107 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 MIR873-201ENST00000401120 77 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 RPS27P16-201ENST00000425758 201 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 AL606517.2-201ENST00000442855 241 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 Y_RNA.653-201ENST00000459091 95 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 AC108210.2-201ENST00000503681 201 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 RNU7-172P-201ENST00000517125 64 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms