Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 HMGN2P34-201ENST00000437647 269 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 AC025465.3-201ENST00000510570 311 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 AC025647.1-201ENST00000517879 253 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 AC091144.1-201ENST00000519573 138 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 HSBP1P1-201ENST00000555205 166 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 BX248123.2-201ENST00000606318 124 ntBASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SMC4Q9NTJ3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2□□□□□ -2.09
SMC4Q9NTJ3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.4-201ENST00000362333 112 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 RNU6-879P-201ENST00000364328 108 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 RNU6-708P-201ENST00000384217 107 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 RNU6-1145P-201ENST00000384246 107 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 MIR1323-201ENST00000408090 73 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 RPL23AP36-201ENST00000413895 458 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 AC016909.1-201ENST00000415916 166 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 MTCO2P27-201ENST00000420740 428 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2□□□□□ -2.09
SMC4Q9NTJ3 AC108729.3-201ENST00000513484 108 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 RNA5SP481-201ENST00000516814 122 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 AC084364.2-201ENST00000546924 395 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 AL133255.1-201ENST00000606374 441 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 AC138305.3-201ENST00000624988 240 ntBASIC2□□□□□ -2.09
SMC4Q9NTJ3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.5-201ENST00000362334 102 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 RNU4-42P-201ENST00000364738 142 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 RNU6-360P-201ENST00000390944 104 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 MIR934-201ENST00000401241 83 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 FTH1P12-201ENST00000432137 551 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 AC027575.1-201ENST00000481064 460 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.683-201ENST00000516508 93 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 AC024995.1-201ENST00000523014 93 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 AC006001.4-201ENST00000622243 395 ntBASIC1.99□□□□□ -2.09
SMC4Q9NTJ3 RNU6-1115P-201ENST00000362490 106 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 RNU6-1301P-201ENST00000362724 104 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 RNU6-490P-201ENST00000362985 107 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.394-201ENST00000383942 103 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 MT-TD-201ENST00000387419 68 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.592-201ENST00000410274 109 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 ELOCP21-201ENST00000412558 336 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 CYCSP23-201ENST00000519781 313 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 AC080078.3-201ENST00000605407 463 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 MIR8074-201ENST00000615081 81 ntBASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.98□□□□□ -2.09
SMC4Q9NTJ3 MTND5P10-201ENST00000603719 1809 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.146-201ENST00000363549 102 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 SNORA33-201ENST00000363664 130 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 Y_RNA.314-201ENST00000365114 102 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 SNORA69.1-201ENST00000390904 137 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 MIR1253-201ENST00000408273 105 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 AC114482.1-201ENST00000418010 247 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 RNA5SP437-201ENST00000517249 129 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 AP002001.1-203ENST00000534002 267 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 MIR4498-201ENST00000577599 66 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 AL050343.2-201ENST00000607338 280 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 AC073544.1-201ENST00000600110 1595 ntBASIC1.97□□□□□ -2.09
SMC4Q9NTJ3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 AC236972.2-201ENST00000434979 310 ntBASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 HSPE1P21-201ENST00000438283 308 ntBASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 HSPE1P9-201ENST00000440046 311 ntBASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 UBE2V1P7-201ENST00000446395 340 ntBASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 RPL26P26-201ENST00000480251 434 ntBASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 RPL36AP21-201ENST00000490372 323 ntBASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 HMGN1P13-201ENST00000505795 138 ntBASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 MTND4P29-201ENST00000503122 1372 ntBASIC1.96□□□□□ -2.1
SMC4Q9NTJ3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 Y_RNA.80-201ENST00000362996 102 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 RNU6-439P-201ENST00000384188 106 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 Y_RNA.485-201ENST00000384395 102 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 RNU6-997P-201ENST00000384725 107 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 MIR625-201ENST00000385047 85 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 RNU2-7P-201ENST00000410794 178 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 AC108667.1-201ENST00000428618 249 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 TOMM22P2-201ENST00000430735 237 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 RNU6-107P-201ENST00000516643 102 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 SNORD53B-201ENST00000577887 78 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 AC022432.1-201ENST00000595739 310 ntBASIC1.95□□□□□ -2.1
SMC4Q9NTJ3 AC133104.2-201ENST00000615272 193 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 243.1 ms