Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 AC091951.2-201ENST00000500762 203 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 RNU7-128P-201ENST00000517247 62 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 AC024995.1-201ENST00000523014 93 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 AC018448.1-201ENST00000552843 316 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 MIR4285-201ENST00000581001 85 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 AC022432.1-201ENST00000595739 310 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 RBM11P1-201ENST00000604951 799 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 U6.73-201ENST00000619194 103 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-1301P-201ENST00000362724 104 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-271P-201ENST00000363858 105 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RNU1-42P-201ENST00000364033 160 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 Y_RNA.259-201ENST00000364619 101 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-1264P-201ENST00000383891 107 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 Y_RNA.498-201ENST00000384460 102 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 Y_RNA.577-201ENST00000384794 101 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 MIR934-201ENST00000401241 83 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RPS27P1-201ENST00000450552 247 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 AC112492.4-201ENST00000456549 352 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 snoU13.23-201ENST00000458863 104 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-625P-201ENST00000459412 107 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RPS27P22-201ENST00000478056 241 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 AC010469.2-201ENST00000496412 480 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-507P-201ENST00000516045 100 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-970P-201ENST00000516312 107 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 RN7SKP49-201ENST00000516675 260 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 AP002001.1-203ENST00000534002 267 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 AC015720.1-201ENST00000565251 277 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 MIR4709-201ENST00000577272 72 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 MIR4801-201ENST00000582704 82 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 AL929325.1-201ENST00000603096 117 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 AC022217.4-201ENST00000604389 163 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 AL645939.4-201ENST00000604495 135 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 AC073544.1-201ENST00000600110 1595 ntBASIC1.3□□□□□ -2.2
EXOSC3Q9NQT5 Y_RNA.387-201ENST00000383918 102 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-926P-201ENST00000384075 107 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 SNORD116-29-201ENST00000384516 83 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 MIR625-201ENST00000385047 85 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 SNORA69.1-201ENST00000390904 137 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 AL355796.1-201ENST00000406706 323 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 SNORA11.2-201ENST00000408318 127 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 SNORD12B-201ENST00000410433 91 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 SNORA40.9-201ENST00000515895 93 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-470P-201ENST00000515954 104 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 CYCSP23-201ENST00000519781 313 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 SUB1P3-201ENST00000564581 315 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 MIR4438-201ENST00000585271 93 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 AL132765.2-201ENST00000610812 351 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 ICE2P2-201ENST00000483823 2787 ntBASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.29□□□□□ -2.2
EXOSC3Q9NQT5 RNU1-17P-201ENST00000363022 152 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 SNORA20B-201ENST00000384220 132 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 MTCYBP4-201ENST00000401524 249 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 Y_RNA.592-201ENST00000410274 109 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 RAB28P5-201ENST00000427490 651 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 FTH1P12-201ENST00000432137 551 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 SNRPGP13-201ENST00000442212 177 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 MRPS10P1-201ENST00000448483 130 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 RNU1-98P-201ENST00000458992 160 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 RPS26P45-201ENST00000471748 340 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 SNORA31.10-201ENST00000516482 106 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-875P-201ENST00000516488 106 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 AL355375.2-201ENST00000574825 175 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
EXOSC3Q9NQT5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-407P-201ENST00000365280 104 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 Y_RNA.384-201ENST00000383909 102 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 MIR764-201ENST00000390811 85 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 RNY4P36-201ENST00000391116 96 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 MTND4P28-201ENST00000426217 387 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 RPS29P23-201ENST00000458635 123 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 AC010598.1-201ENST00000510378 103 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 AC074133.1-201ENST00000515696 183 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 RNU7-99P-201ENST00000516271 62 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 AC019176.1-201ENST00000518519 225 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 MIR548S-201ENST00000581352 82 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 AC073413.2-201ENST00000604332 360 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 AC080078.3-201ENST00000605407 463 ntBASIC1.27□□□□□ -2.21
EXOSC3Q9NQT5 AC025253.1-201ENST00000613623 543 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms