Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL356387.2-201ENST00000422272 243 ntBASIC4.6□□□□□ -1.67
RTN4Q9NQC3 HMGN2P3-201ENST00000433603 273 ntBASIC4.6□□□□□ -1.67
RTN4Q9NQC3 NDUFB1P1-201ENST00000435191 180 ntBASIC4.6□□□□□ -1.67
RTN4Q9NQC3 HMGN2P5-201ENST00000436882 273 ntBASIC4.6□□□□□ -1.67
RTN4Q9NQC3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4Q9NQC3 AC092991.1-201ENST00000477176 376 ntBASIC4.6□□□□□ -1.67
RTN4Q9NQC3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4Q9NQC3 AC008011.1-201ENST00000545989 227 ntBASIC4.6□□□□□ -1.67
RTN4Q9NQC3 AC131055.1-201ENST00000584626 316 ntBASIC4.6□□□□□ -1.67
RTN4Q9NQC3 U7.2-201ENST00000607576 63 ntBASIC4.6□□□□□ -1.67
RTN4Q9NQC3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4Q9NQC3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4Q9NQC3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RTN4Q9NQC3 MIR520A-201ENST00000384862 85 ntBASIC4.59□□□□□ -1.67
RTN4Q9NQC3 RNA5SP127-201ENST00000411051 133 ntBASIC4.59□□□□□ -1.67
RTN4Q9NQC3 MTND4LP9-201ENST00000427694 174 ntBASIC4.59□□□□□ -1.67
RTN4Q9NQC3 AC008267.6-201ENST00000441664 139 ntBASIC4.59□□□□□ -1.67
RTN4Q9NQC3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.59□□□□□ -1.67
RTN4Q9NQC3 RNU6-479P-201ENST00000516348 105 ntBASIC4.59□□□□□ -1.67
RTN4Q9NQC3 MIR4700-201ENST00000578311 74 ntBASIC4.59□□□□□ -1.67
RTN4Q9NQC3 MIR4425-201ENST00000580572 84 ntBASIC4.59□□□□□ -1.67
RTN4Q9NQC3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.59□□□□□ -1.67
RTN4Q9NQC3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTN4Q9NQC3 AL161431.1-201ENST00000618966 4205 ntBASIC4.58□□□□□ -1.68
RTN4Q9NQC3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RTN4Q9NQC3 RNA5SP109-201ENST00000391010 116 ntBASIC4.58□□□□□ -1.68
RTN4Q9NQC3 SNRPGP13-201ENST00000442212 177 ntBASIC4.58□□□□□ -1.68
RTN4Q9NQC3 RPS29P19-201ENST00000479709 171 ntBASIC4.58□□□□□ -1.68
RTN4Q9NQC3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.58□□□□□ -1.68
RTN4Q9NQC3 MIR4529-201ENST00000578110 78 ntBASIC4.58□□□□□ -1.68
RTN4Q9NQC3 Y_RNA.757-201ENST00000578934 114 ntBASIC4.58□□□□□ -1.68
RTN4Q9NQC3 MIR4738-201ENST00000579134 87 ntBASIC4.58□□□□□ -1.68
RTN4Q9NQC3 MIR6820-201ENST00000611508 62 ntBASIC4.58□□□□□ -1.68
RTN4Q9NQC3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.58□□□□□ -1.68
RTN4Q9NQC3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTN4Q9NQC3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTN4Q9NQC3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTN4Q9NQC3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.57□□□□□ -1.68
RTN4Q9NQC3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4Q9NQC3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4Q9NQC3 MIR624-201ENST00000385217 97 ntBASIC4.57□□□□□ -1.68
RTN4Q9NQC3 AC110768.1-201ENST00000509222 400 ntBASIC4.57□□□□□ -1.68
RTN4Q9NQC3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.57□□□□□ -1.68
RTN4Q9NQC3 AL161756.2-201ENST00000604597 246 ntBASIC4.57□□□□□ -1.68
RTN4Q9NQC3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4Q9NQC3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.57□□□□□ -1.68
RTN4Q9NQC3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4Q9NQC3 AC007336.1-201ENST00000576365 3828 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.56□□□□□ -1.68
RTN4Q9NQC3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.56□□□□□ -1.68
RTN4Q9NQC3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.56□□□□□ -1.68
RTN4Q9NQC3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.56□□□□□ -1.68
RTN4Q9NQC3 SNORD9-201ENST00000362566 104 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 RNU1-14P-201ENST00000362759 152 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 Y_RNA.66-201ENST00000362862 102 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 RNU6-888P-201ENST00000363010 101 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 SNORA63D-201ENST00000364359 132 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 RNU6-1082P-201ENST00000364574 107 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 RNU6-1292P-201ENST00000383856 107 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 MIR129-1-201ENST00000384972 72 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 RNU2-7P-201ENST00000410794 178 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 AC073264.2-201ENST00000448886 166 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 RN7SL98P-201ENST00000462271 300 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 RN7SL691P-201ENST00000494487 301 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 RNA5SP481-201ENST00000516814 122 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.56□□□□□ -1.68
RTN4Q9NQC3 AC005000.2-201ENST00000605468 310 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 AC011603.4-201ENST00000611325 277 ntBASIC4.56□□□□□ -1.68
RTN4Q9NQC3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4Q9NQC3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.55□□□□□ -1.68
RTN4Q9NQC3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4Q9NQC3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4Q9NQC3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
RTN4Q9NQC3 Y_RNA.120-201ENST00000363304 110 ntBASIC4.55□□□□□ -1.68
RTN4Q9NQC3 Y_RNA.251-201ENST00000364551 99 ntBASIC4.55□□□□□ -1.68
RTN4Q9NQC3 RNU6-22P-201ENST00000384355 107 ntBASIC4.55□□□□□ -1.68
RTN4Q9NQC3 SNORD72-201ENST00000390994 80 ntBASIC4.55□□□□□ -1.68
RTN4Q9NQC3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.55□□□□□ -1.68
RTN4Q9NQC3 AC109327.1-201ENST00000471666 403 ntBASIC4.55□□□□□ -1.68
RTN4Q9NQC3 AC092185.1-201ENST00000491371 97 ntBASIC4.55□□□□□ -1.68
RTN4Q9NQC3 MIR7703-201ENST00000620784 77 ntBASIC4.55□□□□□ -1.68
RTN4Q9NQC3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RTN4Q9NQC3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RTN4Q9NQC3 RNU1-52P-201ENST00000384190 164 ntBASIC4.54□□□□□ -1.68
RTN4Q9NQC3 RNU2-51P-201ENST00000410708 197 ntBASIC4.54□□□□□ -1.68
RTN4Q9NQC3 TBCAP1-201ENST00000436520 327 ntBASIC4.54□□□□□ -1.68
RTN4Q9NQC3 MTATP6P21-201ENST00000440681 189 ntBASIC4.54□□□□□ -1.68
RTN4Q9NQC3 STAG3L5P-204ENST00000443759 179 ntBASIC4.54□□□□□ -1.68
RTN4Q9NQC3 RPS29P22-201ENST00000472363 168 ntBASIC4.54□□□□□ -1.68
RTN4Q9NQC3 AC099522.1-202ENST00000514718 367 ntBASIC4.54□□□□□ -1.68
RTN4Q9NQC3 RNU6-313P-201ENST00000516317 112 ntBASIC4.54□□□□□ -1.68
RTN4Q9NQC3 RNA5SP49-201ENST00000516450 115 ntBASIC4.54□□□□□ -1.68
RTN4Q9NQC3 RNA5SP519-201ENST00000516480 119 ntBASIC4.54□□□□□ -1.68
RTN4Q9NQC3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4Q9NQC3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4Q9NQC3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RTN4Q9NQC3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.53□□□□□ -1.68
RTN4Q9NQC3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RTN4Q9NQC3 RPS27P29-201ENST00000463110 252 ntBASIC4.53□□□□□ -1.68
RTN4Q9NQC3 RN7SL807P-201ENST00000470923 297 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms