Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.02□□□□□ -1.93
CD248Q9HCU0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.02□□□□□ -1.93
CD248Q9HCU0 RN7SL297P-201ENST00000483161 293 ntBASIC3.02□□□□□ -1.93
CD248Q9HCU0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.02□□□□□ -1.93
CD248Q9HCU0 YWHAEP4-201ENST00000505390 198 ntBASIC3.02□□□□□ -1.93
CD248Q9HCU0 RNU4-57P-201ENST00000515980 135 ntBASIC3.02□□□□□ -1.93
CD248Q9HCU0 RNU6-1007P-201ENST00000516586 107 ntBASIC3.02□□□□□ -1.93
CD248Q9HCU0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.02□□□□□ -1.93
CD248Q9HCU0 MIR3923-201ENST00000579521 83 ntBASIC3.02□□□□□ -1.93
CD248Q9HCU0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.02□□□□□ -1.93
CD248Q9HCU0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.02□□□□□ -1.93
CD248Q9HCU0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CD248Q9HCU0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CD248Q9HCU0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CD248Q9HCU0 AC068700.1-201ENST00000565862 3754 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CD248Q9HCU0 AC096644.4-201ENST00000563417 2912 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 Y_RNA.572-201ENST00000384757 98 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 CBX3P9-201ENST00000402326 552 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 AL031003.1-201ENST00000404229 172 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 AL355497.1-201ENST00000406262 551 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 BPY2DP-201ENST00000422208 265 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 AC108938.1-201ENST00000451204 136 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 AC083906.5-201ENST00000503722 328 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 RNA5SP367-201ENST00000516557 118 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 RNU6-453P-201ENST00000516819 85 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 RNU6-826P-201ENST00000516827 104 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 AC006199.1-201ENST00000548728 219 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.01□□□□□ -1.93
CD248Q9HCU0 HMGN2P15-201ENST00000585707 270 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 ELOCP29-201ENST00000588193 334 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 AL356280.1-201ENST00000603614 379 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 AC011603.4-201ENST00000611325 277 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 AC007318.2-201ENST00000620999 243 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 MIR7515-201ENST00000637837 67 ntBASIC3.01□□□□□ -1.93
CD248Q9HCU0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.01□□□□□ -1.93
CD248Q9HCU0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CD248Q9HCU0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CD248Q9HCU0 RNU6-1048P-201ENST00000364054 107 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 SNORD115-30-201ENST00000364117 82 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 RNU6-1056P-201ENST00000383996 107 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 MIR616-201ENST00000385293 97 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 AC105272.1-201ENST00000438604 198 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3□□□□□ -1.93
CD248Q9HCU0 AL121914.1-201ENST00000450188 156 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3□□□□□ -1.93
CD248Q9HCU0 RN7SL20P-201ENST00000488827 297 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 SCARNA8-201ENST00000515924 131 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 RNU5F-2P-201ENST00000516066 82 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 AC004486.1-201ENST00000546846 233 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 AL391813.1-201ENST00000603098 260 ntBASIC3□□□□□ -1.93
CD248Q9HCU0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3□□□□□ -1.93
CD248Q9HCU0 AL391516.1-201ENST00000554380 2449 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
CD248Q9HCU0 RNU6-969P-201ENST00000383900 105 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 CYCSP48-201ENST00000417124 323 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.99□□□□□ -1.93
CD248Q9HCU0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.99□□□□□ -1.93
CD248Q9HCU0 AC245047.8-201ENST00000456455 284 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 RNU7-197P-201ENST00000458836 62 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 RN7SL633P-201ENST00000488974 297 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 AC107016.2-201ENST00000547968 190 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 AC079600.2-201ENST00000550076 130 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 AC027176.1-201ENST00000560204 514 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 AC105137.2-201ENST00000569073 466 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 MIR4446-201ENST00000578505 67 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD248Q9HCU0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.99□□□□□ -1.93
CD248Q9HCU0 AL034555.1-201ENST00000604816 211 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 SNORD11B-201ENST00000607707 90 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 AL391903.3-201ENST00000612158 163 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 MIR3199-2-201ENST00000636243 86 ntBASIC2.99□□□□□ -1.93
CD248Q9HCU0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CD248Q9HCU0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD248Q9HCU0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.99□□□□□ -1.93
CD248Q9HCU0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CD248Q9HCU0 AC062016.1-201ENST00000355719 319 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 SNORA25.6-201ENST00000364121 118 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 SNORD87-201ENST00000364849 89 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 RNU6-407P-201ENST00000365280 104 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 RNU6-851P-201ENST00000384565 107 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 MIR526A2-201ENST00000390198 65 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 RNU6-750P-201ENST00000390946 107 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 RNU6-855P-201ENST00000410395 104 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 AC107626.1-201ENST00000471084 183 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 RNU6-659P-201ENST00000516454 104 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 RNU6-344P-201ENST00000516635 111 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.98□□□□□ -1.93
CD248Q9HCU0 AL365361.1-201ENST00000566942 3481 ntBASIC2.98□□□□□ -1.93
CD248Q9HCU0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CD248Q9HCU0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CD248Q9HCU0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CD248Q9HCU0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CD248Q9HCU0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CD248Q9HCU0 AC004944.1-201ENST00000517807 3059 ntBASIC2.97□□□□□ -1.93
CD248Q9HCU0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CD248Q9HCU0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CD248Q9HCU0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CD248Q9HCU0 MIR449A-201ENST00000362113 91 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms