Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.04□□□□□ -2.08
PCDH9Q9HC56 MIR5089-201ENST00000580047 84 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 MIR376A1-201ENST00000616574 68 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 AC091932.3-201ENST00000624223 323 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 AC008873.1-201ENST00000625051 138 ntBASIC2.04□□□□□ -2.08
PCDH9Q9HC56 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PCDH9Q9HC56 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
PCDH9Q9HC56 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
PCDH9Q9HC56 RNU6-1175P-201ENST00000365200 107 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.332-201ENST00000365271 113 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 RNU6-1264P-201ENST00000383891 107 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 MIR548F4-201ENST00000408515 105 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 RNU6-121P-201ENST00000410525 99 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 RNU2-40P-201ENST00000410833 196 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 SRIP3-201ENST00000413200 219 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PCDH9Q9HC56 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.03□□□□□ -2.08
PCDH9Q9HC56 LINC01399-202ENST00000458450 244 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 AC010531.2-201ENST00000465012 153 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 RNU6-948P-201ENST00000516374 107 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 SNORA31.25-201ENST00000517242 134 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 AC026271.5-201ENST00000577873 130 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 MIR4300-201ENST00000581016 96 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 AC011373.1-201ENST00000607270 237 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
PCDH9Q9HC56 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
PCDH9Q9HC56 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.09
PCDH9Q9HC56 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
PCDH9Q9HC56 AC092881.1-201ENST00000638218 2733 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PCDH9Q9HC56 MIR340-201ENST00000362125 95 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 Y_RNA.101-201ENST00000363154 102 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 Y_RNA.133-201ENST00000363428 110 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 Y_RNA.149-201ENST00000363558 117 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 RNU6-1310P-201ENST00000384153 107 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 RNU6-713P-201ENST00000384761 107 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 Y_RNA.574-201ENST00000384766 95 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PCDH9Q9HC56 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 MIR1185-2-201ENST00000408687 86 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 RNU2-2P-201ENST00000410396 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 RPL21P38-201ENST00000418090 167 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 RNA5SP364-201ENST00000516938 78 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 RNU6-570P-201ENST00000517051 105 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 RNU2-19P-201ENST00000517288 84 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 AC027419.1-201ENST00000522976 328 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 AL031274.2-201ENST00000599419 203 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.15-201ENST00000611544 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.16-201ENST00000613119 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.12-201ENST00000613778 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.20-201ENST00000613956 192 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.9-201ENST00000615427 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.11-201ENST00000616345 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.2-201ENST00000616535 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.3-201ENST00000617785 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.19-201ENST00000618602 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 RNU2-1-201ENST00000618664 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.6-201ENST00000619225 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.5-201ENST00000619465 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 U2.10-201ENST00000620268 191 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 AC006001.4-201ENST00000622243 395 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 snoZ196.1-201ENST00000625269 89 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PCDH9Q9HC56 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
PCDH9Q9HC56 CENPCP1-201ENST00000533085 2578 ntBASIC2.02□□□□□ -2.09
PCDH9Q9HC56 LINC02555-201ENST00000563933 1951 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 AP006437.1-201ENST00000641440 3685 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.01□□□□□ -2.09
PCDH9Q9HC56 SNORD113-8-201ENST00000363497 74 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 RNU6-454P-201ENST00000364292 107 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 SNORD114-6-201ENST00000364393 72 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 MIR215-201ENST00000384858 110 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 RNU5A-5P-201ENST00000411054 116 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 EDDM3CP-201ENST00000415977 425 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.01□□□□□ -2.09
PCDH9Q9HC56 AL731563.1-201ENST00000442202 214 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 RPL23AP3-201ENST00000453844 468 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 AP003733.2-201ENST00000529409 171 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 PRR13P7-201ENST00000605538 430 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.01□□□□□ -2.09
PCDH9Q9HC56 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.01□□□□□ -2.09
PCDH9Q9HC56 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PCDH9Q9HC56 Y_RNA.331-201ENST00000365267 102 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 RNU6-574P-201ENST00000384265 107 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 RNU6-21P-201ENST00000384710 107 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 MIR568-201ENST00000385036 95 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 SNORD115-46-201ENST00000390982 71 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 TOMM22P2-201ENST00000430735 237 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
PCDH9Q9HC56 MTCO1P44-201ENST00000441935 243 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 NDUFB4P10-201ENST00000452541 359 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 RN7SL429P-201ENST00000479090 223 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 RN7SL489P-201ENST00000486185 223 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 RN7SL327P-201ENST00000488659 223 ntBASIC2□□□□□ -2.09
PCDH9Q9HC56 RNU6-1143P-201ENST00000516125 104 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms