Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RPL23AP58-201ENST00000440453 469 ntBASIC3.08□□□□□ -1.92
BCAS3Q9H6U6 HMGN2P9-201ENST00000476875 229 ntBASIC3.08□□□□□ -1.92
BCAS3Q9H6U6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.08□□□□□ -1.92
BCAS3Q9H6U6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.08□□□□□ -1.92
BCAS3Q9H6U6 AC090115.4-201ENST00000609970 188 ntBASIC3.08□□□□□ -1.92
BCAS3Q9H6U6 AL365222.1-201ENST00000614661 98 ntBASIC3.08□□□□□ -1.92
BCAS3Q9H6U6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BCAS3Q9H6U6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 AC009487.4-201ENST00000624969 3585 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 snoU2_19.1-201ENST00000362361 80 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 Y_RNA.24-201ENST00000362508 103 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 RNA5SP295-201ENST00000362655 121 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 RNU6-1205P-201ENST00000363625 106 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 RNU4-10P-201ENST00000364383 140 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 RNY3P5-201ENST00000384127 102 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 MIR873-201ENST00000401120 77 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 MIR300-201ENST00000401138 83 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 RNU4-43P-201ENST00000410628 137 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 RNA5SP21-201ENST00000410917 96 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 RPL23AP7-203ENST00000449021 469 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 HSPE1P18-201ENST00000517602 280 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 ZNF861P-201ENST00000588126 639 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 AC008739.2-201ENST00000597006 317 ntBASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
BCAS3Q9H6U6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 Y_RNA.172-201ENST00000363765 102 ntBASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 RNU6-969P-201ENST00000383900 105 ntBASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 MTND4LP9-201ENST00000427694 174 ntBASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 RNU7-197P-201ENST00000458836 62 ntBASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 TRBV12-1-201ENST00000479785 344 ntBASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 RNU6-453P-201ENST00000516819 85 ntBASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 MIR3646-201ENST00000578301 84 ntBASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 MAPK10-322ENST00000641485 4530 ntBASIC3.06□□□□□ -1.92
BCAS3Q9H6U6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 RNU1-105P-201ENST00000363470 161 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 Y_RNA.572-201ENST00000384757 98 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 MIR196B-201ENST00000384852 84 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 SNORA12-201ENST00000391162 147 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 AL590004.2-201ENST00000404787 371 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 AL137159.1-201ENST00000452808 512 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 AC092185.1-201ENST00000491371 97 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 RNU7-115P-201ENST00000516433 55 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 RNU6-1098P-201ENST00000516772 96 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 AC004832.5-201ENST00000608677 401 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BCAS3Q9H6U6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 AC007256.1-201ENST00000392253 2765 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 AC110774.1-201ENST00000623567 2018 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 Y_RNA.229-201ENST00000364347 113 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 RNU6-1305P-201ENST00000364353 104 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 Y_RNA.273-201ENST00000364703 102 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 RNU4-11P-201ENST00000365287 132 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 RNU6-643P-201ENST00000384018 107 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 RNU6-1323P-201ENST00000384025 107 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 MIR9-1-201ENST00000385198 89 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 MIR513C-201ENST00000401352 84 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 MIR4724-201ENST00000579485 89 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 AC100821.1-201ENST00000523153 2479 ntBASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
BCAS3Q9H6U6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 Y_RNA.127-201ENST00000363386 109 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 RNA5SP68-201ENST00000363885 119 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 MIR539-201ENST00000365690 78 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 AL355796.1-201ENST00000406706 323 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 MIR1283-1-201ENST00000408494 87 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 MIR1278-201ENST00000408753 81 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 RNU6-221P-201ENST00000459541 99 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 AC018630.3-201ENST00000542637 96 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 RPL30P11-203ENST00000598995 310 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 AP003357.1-201ENST00000604497 148 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 MIR548AY-201ENST00000617669 107 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 MIR3658-201ENST00000636291 56 ntBASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
BCAS3Q9H6U6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms