Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL133475.1-201ENST00000404414 305 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 RPL23AP36-201ENST00000413895 458 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 AC019205.3-201ENST00000424573 156 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 AL356320.1-201ENST00000429616 163 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 UBL5P3-201ENST00000475112 231 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 RNU5F-2P-201ENST00000516066 82 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 AL713866.2-201ENST00000603579 219 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 UCA1.1-201ENST00000620952 75 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 AC091932.3-201ENST00000624223 323 ntBASIC2.47□□□□□ -2.01
EBF3Q9H4W6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.47□□□□□ -2.01
EBF3Q9H4W6 RNU4-56P-201ENST00000364700 142 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 RNU1-91P-201ENST00000364746 163 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 SNORD50.2-201ENST00000365465 70 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 MIR627-201ENST00000384979 97 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 MIR504-201ENST00000385065 83 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.595-201ENST00000410403 105 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 AIMP1P2-201ENST00000425294 312 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 AC024067.1-201ENST00000426199 223 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 RAB28P5-201ENST00000427490 651 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 AC005042.3-201ENST00000453230 174 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 RNU6-625P-201ENST00000459412 107 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 AC007215.1-201ENST00000464893 276 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.46□□□□□ -2.02
EBF3Q9H4W6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.46□□□□□ -2.02
EBF3Q9H4W6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.46□□□□□ -2.02
EBF3Q9H4W6 PRELID2P1-201ENST00000552837 301 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.46□□□□□ -2.02
EBF3Q9H4W6 DEFB117-201ENST00000602356 141 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 AC005520.5-201ENST00000613926 164 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 SNORD98-201ENST00000636377 67 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.46□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.45□□□□□ -2.02
EBF3Q9H4W6 RNU6-727P-201ENST00000363592 107 ntBASIC2.45□□□□□ -2.02
EBF3Q9H4W6 RNU6-818P-201ENST00000364837 108 ntBASIC2.45□□□□□ -2.02
EBF3Q9H4W6 AC004866.1-201ENST00000411748 78 ntBASIC2.45□□□□□ -2.02
EBF3Q9H4W6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.45□□□□□ -2.02
EBF3Q9H4W6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.45□□□□□ -2.02
EBF3Q9H4W6 RPL31P41-201ENST00000477967 372 ntBASIC2.45□□□□□ -2.02
EBF3Q9H4W6 RNA5SP54-201ENST00000516951 92 ntBASIC2.45□□□□□ -2.02
EBF3Q9H4W6 SUMO2P18-201ENST00000518873 252 ntBASIC2.45□□□□□ -2.02
EBF3Q9H4W6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.45□□□□□ -2.02
EBF3Q9H4W6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.45□□□□□ -2.02
EBF3Q9H4W6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.45□□□□□ -2.02
EBF3Q9H4W6 CYP4A27P-201ENST00000567218 190 ntBASIC2.45□□□□□ -2.02
EBF3Q9H4W6 AC108706.1-201ENST00000611053 297 ntBASIC2.45□□□□□ -2.02
EBF3Q9H4W6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.45□□□□□ -2.02
EBF3Q9H4W6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.45□□□□□ -2.02
EBF3Q9H4W6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
EBF3Q9H4W6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
EBF3Q9H4W6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
EBF3Q9H4W6 RNU6-1272P-201ENST00000362776 107 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.179-201ENST00000363844 90 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.262-201ENST00000364641 102 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 RNU1-57P-201ENST00000384491 166 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 MIR186-201ENST00000384988 86 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 AL357139.1-201ENST00000407792 426 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 AL135790.2-201ENST00000437701 267 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.637-201ENST00000459424 114 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 AL121594.1-201ENST00000475906 575 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 RPL36AP48-201ENST00000485521 314 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.44□□□□□ -2.02
EBF3Q9H4W6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 IGKV3-31-201ENST00000523109 329 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.44□□□□□ -2.02
EBF3Q9H4W6 MIR5692C2-201ENST00000577959 77 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 AL034555.1-201ENST00000604816 211 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
EBF3Q9H4W6 AC005336.3-201ENST00000623833 2679 ntBASIC2.44□□□□□ -2.02
EBF3Q9H4W6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
EBF3Q9H4W6 RNU6-1210P-201ENST00000363775 107 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 RNU6-454P-201ENST00000364292 107 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 RNU6-793P-201ENST00000384233 104 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.571-201ENST00000384753 98 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 RNU2-54P-201ENST00000410299 190 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 BTF3P11-201ENST00000426582 477 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.43□□□□□ -2.02
EBF3Q9H4W6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
EBF3Q9H4W6 RNU6-155P-201ENST00000516347 100 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 MIR1273D-201ENST00000577266 86 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 MIR3923-201ENST00000579521 83 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
EBF3Q9H4W6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
EBF3Q9H4W6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.43□□□□□ -2.02
EBF3Q9H4W6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
EBF3Q9H4W6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.42□□□□□ -2.02
EBF3Q9H4W6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
EBF3Q9H4W6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
EBF3Q9H4W6 RNU6-655P-201ENST00000362858 107 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.272-201ENST00000364696 102 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 SNORA72.2-201ENST00000365028 127 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 SNORD116-18-201ENST00000383961 92 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.415-201ENST00000384012 112 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.498-201ENST00000384460 102 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms