Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RNU6-1264P-201ENST00000383891 107 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 RNY4P36-201ENST00000391116 96 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 Y_RNA.605-201ENST00000410577 105 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 ELOCP21-201ENST00000412558 336 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 AC005002.2-201ENST00000438228 269 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.54□□□□□ -2.16
UBQLN3Q9H347 SNORD65B-201ENST00000459126 73 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 AC005908.1-201ENST00000468701 347 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 RNU7-4P-201ENST00000516961 62 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 AC024995.1-201ENST00000523014 93 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 AC022432.1-201ENST00000595739 310 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 AC080078.3-201ENST00000605407 463 ntBASIC1.54□□□□□ -2.16
UBQLN3Q9H347 Y_RNA.67-201ENST00000362870 100 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 RNY3P11-201ENST00000364153 102 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 SNORA4.2-201ENST00000365313 147 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.53□□□□□ -2.16
UBQLN3Q9H347 SNORD116-29-201ENST00000384516 83 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 Y_RNA.529-201ENST00000384586 119 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 RNA5SP109-201ENST00000391010 116 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 Y_RNA.592-201ENST00000410274 109 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 SNORD12B-201ENST00000410433 91 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 COX6CP10-201ENST00000416832 224 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 MTND4P28-201ENST00000426217 387 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.53□□□□□ -2.16
UBQLN3Q9H347 FTH1P12-201ENST00000432137 551 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 SNORD13-201ENST00000459299 104 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 RNU6-625P-201ENST00000459412 107 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 RPS27P22-201ENST00000478056 241 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 AC074133.1-201ENST00000515696 183 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 SNORA40.9-201ENST00000515895 93 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 RNU6-970P-201ENST00000516312 107 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 Y_RNA.718-201ENST00000517110 102 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 MIR2355-201ENST00000517199 87 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 AC144568.1-201ENST00000520139 137 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 AC023157.2-201ENST00000540596 141 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 MIR502-201ENST00000606349 86 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 AC087588.2-201ENST00000617667 426 ntBASIC1.53□□□□□ -2.16
UBQLN3Q9H347 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
UBQLN3Q9H347 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
UBQLN3Q9H347 RNU6-1301P-201ENST00000362724 104 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 RNA5SP363-201ENST00000365072 115 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 RNU6-926P-201ENST00000384075 107 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 RNY3P14-201ENST00000384309 102 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 RNA5SP475-201ENST00000410568 110 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.52□□□□□ -2.17
UBQLN3Q9H347 MTCO2P27-201ENST00000420740 428 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 MRPS18CP6-201ENST00000423587 223 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 JTBP1-201ENST00000441314 247 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.52□□□□□ -2.17
UBQLN3Q9H347 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.52□□□□□ -2.17
UBQLN3Q9H347 ELOCP24-201ENST00000456370 334 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 Y_RNA.632-201ENST00000459189 102 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 snoU13.27-201ENST00000459278 104 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 RPL26P26-201ENST00000480251 434 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 AC010469.2-201ENST00000496412 480 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 MIR4438-201ENST00000585271 93 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 U6.73-201ENST00000619194 103 ntBASIC1.52□□□□□ -2.17
UBQLN3Q9H347 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
UBQLN3Q9H347 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
UBQLN3Q9H347 Y_RNA.263-201ENST00000364659 114 ntBASIC1.51□□□□□ -2.17
UBQLN3Q9H347 SNORA17.3-201ENST00000391159 129 ntBASIC1.51□□□□□ -2.17
UBQLN3Q9H347 HSPE1P24-201ENST00000450782 238 ntBASIC1.51□□□□□ -2.17
UBQLN3Q9H347 RNU7-34P-201ENST00000459394 64 ntBASIC1.51□□□□□ -2.17
UBQLN3Q9H347 AC010598.1-201ENST00000510378 103 ntBASIC1.51□□□□□ -2.17
UBQLN3Q9H347 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.51□□□□□ -2.17
UBQLN3Q9H347 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.51□□□□□ -2.17
UBQLN3Q9H347 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
UBQLN3Q9H347 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.51□□□□□ -2.17
UBQLN3Q9H347 MIR4422-201ENST00000581938 83 ntBASIC1.51□□□□□ -2.17
UBQLN3Q9H347 Y_RNA.804-201ENST00000615262 101 ntBASIC1.51□□□□□ -2.17
UBQLN3Q9H347 U6.108-201ENST00000637764 58 ntBASIC1.51□□□□□ -2.17
UBQLN3Q9H347 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBQLN3Q9H347 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.51□□□□□ -2.17
UBQLN3Q9H347 Y_RNA.70-201ENST00000362886 110 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 RNU6-490P-201ENST00000362985 107 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 MIR559-201ENST00000385188 96 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 SNORA67.5-201ENST00000391036 107 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 RPL21P1-201ENST00000399532 476 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 RAB28P5-201ENST00000427490 651 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.5□□□□□ -2.17
UBQLN3Q9H347 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 FGF7P4-201ENST00000509595 295 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 RNU6-699P-201ENST00000517081 110 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.5□□□□□ -2.17
UBQLN3Q9H347 AC093027.1-201ENST00000546698 429 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 MIR8063-201ENST00000621930 81 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 MIR3674-201ENST00000636576 68 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 AC112487.2-201ENST00000637950 304 ntBASIC1.5□□□□□ -2.17
UBQLN3Q9H347 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBQLN3Q9H347 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBQLN3Q9H347 RNU6-407P-201ENST00000365280 104 ntBASIC1.49□□□□□ -2.17
UBQLN3Q9H347 RNU6-1040P-201ENST00000383974 107 ntBASIC1.49□□□□□ -2.17
UBQLN3Q9H347 SNORA20B-201ENST00000384220 132 ntBASIC1.49□□□□□ -2.17
UBQLN3Q9H347 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
UBQLN3Q9H347 MIR628-201ENST00000385229 95 ntBASIC1.49□□□□□ -2.17
UBQLN3Q9H347 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
UBQLN3Q9H347 AC010154.1-201ENST00000425857 269 ntBASIC1.49□□□□□ -2.17
UBQLN3Q9H347 AC096644.2-201ENST00000429278 159 ntBASIC1.49□□□□□ -2.17
UBQLN3Q9H347 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 384 ms