Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 HMGN1P18-201ENST00000457642 277 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 ATP5EP1-201ENST00000510257 156 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 SNORA64.4-201ENST00000516632 81 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-197P-201ENST00000516680 100 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 SNORA48.11-201ENST00000517015 89 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 IGKV2-26-201ENST00000518305 343 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 AL031274.2-201ENST00000599419 203 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 AC093732.2-201ENST00000607950 274 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 AC080128.1-201ENST00000474389 1917 ntBASIC3.4□□□□□ -1.86
TRIM56Q9BRZ2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM56Q9BRZ2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 RNU1-70P-201ENST00000362618 164 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-438P-201ENST00000365561 103 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 Y_RNA.432-201ENST00000384087 111 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 MIR218-2-201ENST00000385006 110 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 RNU2-52P-201ENST00000410680 190 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 CYCSP35-201ENST00000451978 304 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 SNRPGP8-201ENST00000454064 226 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 AC008155.2-201ENST00000464337 397 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 AC027419.1-201ENST00000522976 328 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 Y_RNA.757-201ENST00000578934 114 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 AC120024.3-201ENST00000603167 156 ntBASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
TRIM56Q9BRZ2 AC092435.3-201ENST00000565538 3654 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 SNORA25.7-201ENST00000364375 127 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 MIR181A2-201ENST00000384863 110 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 MIR218-1-201ENST00000384999 110 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 SNORA11.2-201ENST00000408318 127 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 AC016717.1-201ENST00000448918 286 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 AC010531.2-201ENST00000465012 153 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 CKS1BP2-201ENST00000497342 240 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 AC025647.1-201ENST00000517879 253 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 AL160236.1-201ENST00000556317 195 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 AL021707.8-201ENST00000609428 183 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 MIR7851-201ENST00000610611 160 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM56Q9BRZ2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 RNA5SP383-201ENST00000362934 120 ntBASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-153P-201ENST00000364422 104 ntBASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 SNORA72-201ENST00000384339 132 ntBASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 RNVU1-14-201ENST00000384770 164 ntBASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 RNU2-63P-201ENST00000410792 194 ntBASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 AC023449.1-201ENST00000454464 154 ntBASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-1299P-201ENST00000516316 100 ntBASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 MIR2681-201ENST00000581814 105 ntBASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM56Q9BRZ2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-1082P-201ENST00000364574 107 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-1240P-201ENST00000365155 104 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-1064P-201ENST00000410626 104 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 RNU2-32P-201ENST00000411193 191 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 ARF4P2-201ENST00000430209 526 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 AL357134.1-201ENST00000445848 426 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 EEF1B2P7-201ENST00000451177 676 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 RN7SL601P-201ENST00000471221 293 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 AC023141.11-201ENST00000508864 202 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 RNA5SP76-201ENST00000516277 87 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 RNU6-63P-201ENST00000516690 95 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 AC068657.1-201ENST00000520807 306 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 AC104027.1-201ENST00000521887 300 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 AC015720.1-201ENST00000565251 277 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 MIR5195-201ENST00000583555 115 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 AC013412.1-201ENST00000610687 192 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 AC017071.1-201ENST00000564407 2204 ntBASIC3.37□□□□□ -1.87
TRIM56Q9BRZ2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 RNA5SP267-201ENST00000364893 126 ntBASIC3.36□□□□□ -1.87
TRIM56Q9BRZ2 MIR490-201ENST00000384865 128 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms