Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MIR9-1-201ENST00000385198 89 ntBASIC3.19□□□□□ -1.9
DDX11Q96FC9 SNORA26.5-201ENST00000391215 123 ntBASIC3.19□□□□□ -1.9
DDX11Q96FC9 AL441985.1-201ENST00000457727 251 ntBASIC3.19□□□□□ -1.9
DDX11Q96FC9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.19□□□□□ -1.9
DDX11Q96FC9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX11Q96FC9 MIR4435-1-201ENST00000582552 80 ntBASIC3.19□□□□□ -1.9
DDX11Q96FC9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX11Q96FC9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX11Q96FC9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
DDX11Q96FC9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX11Q96FC9 RNU6-859P-201ENST00000362728 107 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 RNU6-1290P-201ENST00000362957 109 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 U3.9-201ENST00000363823 204 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 RNU6-324P-201ENST00000363957 106 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 RNU6-1048P-201ENST00000364054 107 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 Y_RNA.243-201ENST00000364481 109 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 Y_RNA.357-201ENST00000365487 109 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 RPS3P1-201ENST00000456781 192 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 RN7SL297P-201ENST00000483161 293 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX11Q96FC9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX11Q96FC9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX11Q96FC9 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 AC013412.1-201ENST00000610687 192 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 AC013791.1-201ENST00000616619 62 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 Z82195.2-201ENST00000612348 18351 ntBASIC3.18□□□□□ -1.9
DDX11Q96FC9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX11Q96FC9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
DDX11Q96FC9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX11Q96FC9 RNU4-10P-201ENST00000364383 140 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 Y_RNA.361-201ENST00000365515 120 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 Y_RNA.586-201ENST00000391146 98 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 AL031003.1-201ENST00000404229 172 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 RNU6-735P-201ENST00000410612 107 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 RNA5SP21-201ENST00000410917 96 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.17□□□□□ -1.9
DDX11Q96FC9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX11Q96FC9 SNORD116-25-201ENST00000516517 92 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 RNU7-121P-201ENST00000516604 62 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX11Q96FC9 AC027176.1-201ENST00000560204 514 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX11Q96FC9 AC103810.1-201ENST00000579873 453 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 MIR5006-201ENST00000583027 110 ntBASIC3.17□□□□□ -1.9
DDX11Q96FC9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX11Q96FC9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX11Q96FC9 RNU6-655P-201ENST00000362858 107 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 SNORA68.1-201ENST00000364537 132 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 RNU1-57P-201ENST00000384491 166 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 RNU6-239P-201ENST00000390990 99 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 EBAG9P1-201ENST00000418955 543 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 TOMM22P2-201ENST00000430735 237 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 EEF1B2P7-201ENST00000451177 676 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 RPS20P10-201ENST00000451209 253 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 RN7SKP164-201ENST00000516138 266 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 RNU6-62P-201ENST00000516526 102 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 RNU2-44P-201ENST00000516795 194 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 AC021269.2-201ENST00000532318 330 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 Y_RNA.778-201ENST00000620203 90 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 MIR7515-201ENST00000637837 67 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 AC010329.5-201ENST00000623497 2174 ntBASIC3.16□□□□□ -1.9
DDX11Q96FC9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
DDX11Q96FC9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
DDX11Q96FC9 SNORD56.5-201ENST00000364281 72 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 RNU6-1180P-201ENST00000364935 107 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 Y_RNA.368-201ENST00000365547 113 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 Y_RNA.572-201ENST00000384757 98 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 MIR627-201ENST00000384979 97 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 MIR569-201ENST00000385228 96 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 RNU6-710P-201ENST00000410424 105 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 RNA5SP508-201ENST00000411327 119 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 UBBP3-201ENST00000445497 241 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX11Q96FC9 AC079598.5-201ENST00000547460 117 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 MIR4431-201ENST00000579990 94 ntBASIC3.15□□□□□ -1.91
DDX11Q96FC9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DDX11Q96FC9 AC134026.1-201ENST00000623249 2239 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 Y_RNA.81-201ENST00000362997 102 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 RNU6-103P-201ENST00000363686 107 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 snoU2_19.4-201ENST00000364329 80 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 Y_RNA.287-201ENST00000364853 94 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 SNORA72.4-201ENST00000384174 132 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 MIR626-201ENST00000385032 94 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 MIR548B-201ENST00000385247 97 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 RNU6-1168P-201ENST00000390831 104 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 FO393413.1-201ENST00000402892 195 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 AL355497.1-201ENST00000406262 551 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 RN7SKP284-201ENST00000411002 343 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 CR769767.1-201ENST00000436337 346 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 AC010409.1-201ENST00000487382 476 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 AC096725.1-201ENST00000514266 313 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 Y_RNA.797-201ENST00000515977 94 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 RNU6-426P-201ENST00000516464 97 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 AC004486.1-201ENST00000546846 233 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 MIR3684-201ENST00000579779 74 ntBASIC3.14□□□□□ -1.91
DDX11Q96FC9 MIR4744-201ENST00000581563 82 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms