Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC006026.1-201ENST00000444025 1803 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 SNORA33-201ENST00000363664 130 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.263-201ENST00000364659 114 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.387-201ENST00000383918 102 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 RNU6-281P-201ENST00000384212 103 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 RNU6-1297P-201ENST00000384415 104 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 MTCYBP4-201ENST00000401524 249 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 RNU6-1186P-201ENST00000410429 97 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 AC016909.1-201ENST00000415916 166 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 AC004584.2-201ENST00000570407 410 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 SNORD53B-201ENST00000577887 78 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 MIR5690-201ENST00000583739 73 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 AC125232.2-201ENST00000592457 143 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 AP001485.1-201ENST00000604799 199 ntBASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
SNRNP40Q96DI7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 AL391987.6-201ENST00000305671 199 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.70-201ENST00000362886 110 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.116-201ENST00000363292 103 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.796-201ENST00000364268 102 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.799-201ENST00000364992 102 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 SNORD116-29-201ENST00000384516 83 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 MIR518E-201ENST00000385252 88 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 RNU6-1009P-201ENST00000390996 107 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 AC004965.1-201ENST00000413033 213 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 UBE2V1P7-201ENST00000446395 340 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 AC245517.4-201ENST00000448601 281 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 ELOCP24-201ENST00000456370 334 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 AL163195.1-201ENST00000496941 348 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 FRG2DP-202ENST00000566967 323 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 MIR4419B-201ENST00000577260 68 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 AC022432.1-201ENST00000595739 310 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 AC104260.1-201ENST00000616660 539 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 MIR1302-1-201ENST00000637932 143 ntBASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
SNRNP40Q96DI7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 RNU6-890P-201ENST00000384121 107 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.577-201ENST00000384794 101 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 RNY4P36-201ENST00000391116 96 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 MTATP6P23-201ENST00000440153 476 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 AC009474.2-201ENST00000451383 136 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 MTCO3P10-201ENST00000455912 772 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 RNA5SP445-201ENST00000515889 115 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 RNU6-507P-201ENST00000516045 100 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 SNORA77B-201ENST00000578179 125 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 AL645939.4-201ENST00000604495 135 ntBASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
SNRNP40Q96DI7 SNORD33-201ENST00000362761 85 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.122-201ENST00000363331 96 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 RNU6-271P-201ENST00000363858 105 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 RNU6-879P-201ENST00000364328 108 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 SNORA4.2-201ENST00000365313 147 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.557-201ENST00000384680 107 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 MIR329-1-201ENST00000385028 80 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 RNU6-1001P-201ENST00000411265 100 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 AC092423.1-201ENST00000430165 186 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 UQCRBP2-201ENST00000447827 297 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 RNU7-152P-201ENST00000458982 64 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.653-201ENST00000459091 95 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 U8.22-201ENST00000459141 133 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 AC079140.2-201ENST00000506193 142 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 RNU6-120P-201ENST00000516077 103 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 CYCSP23-201ENST00000519781 313 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 AC027419.1-201ENST00000522976 328 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 AC080078.3-201ENST00000605407 463 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 LARP7P1-201ENST00000605576 316 ntBASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.49□□□□□ -2.17
SNRNP40Q96DI7 RNU6-99P-201ENST00000364721 107 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 RNU6-60P-201ENST00000364792 103 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.384-201ENST00000383909 102 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 RNU6-1145P-201ENST00000384246 107 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.529-201ENST00000384586 119 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 RNA5SP109-201ENST00000391010 116 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 TOMM22P2-201ENST00000430735 237 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 AC093019.1-201ENST00000443135 252 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 AC022493.2-201ENST00000506122 481 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.718-201ENST00000517110 102 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 AL355375.2-201ENST00000574825 175 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 MIR3937-201ENST00000580135 106 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 AC133104.2-201ENST00000615272 193 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 MTND4LP32-201ENST00000636111 270 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms