Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU6-271P-201ENST00000363858 105 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 SNORD1A-201ENST00000364968 72 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 RNA5SP323-201ENST00000391094 133 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 RNU11-5P-201ENST00000391216 129 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 SNORA26.9-201ENST00000391322 122 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 COX6CP10-201ENST00000416832 224 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 AL606517.2-201ENST00000442855 241 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 ELOCP24-201ENST00000456370 334 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 RNU6-277P-201ENST00000516272 106 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 SNORA31.10-201ENST00000516482 106 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 AC087588.2-201ENST00000617667 426 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 AC100821.1-201ENST00000523153 2479 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 Y_RNA.142-201ENST00000363491 102 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 RNU6-99P-201ENST00000364721 107 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 Y_RNA.358-201ENST00000365491 99 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 MIR625-201ENST00000385047 85 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 MIR758-201ENST00000390227 88 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 RNA5SP109-201ENST00000391010 116 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 MRPL42P3-201ENST00000401492 326 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 Y_RNA.592-201ENST00000410274 109 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 AC004965.1-201ENST00000413033 213 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 AC092423.1-201ENST00000430165 186 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 AC097462.1-201ENST00000514125 324 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 RNU6-911P-201ENST00000516523 104 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 RNU7-4P-201ENST00000516961 62 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 RNU6-1213P-201ENST00000517075 94 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 AL442163.3-201ENST00000554110 156 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 MIR3683-201ENST00000580847 82 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 MIR4438-201ENST00000585271 93 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 AC133104.2-201ENST00000615272 193 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 MIR8054-201ENST00000620877 86 ntBASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.12□□□□□ -2.23
RPUSD4Q96CM3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 SNORA27.1-201ENST00000362604 124 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 Y_RNA.70-201ENST00000362886 110 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 RNU1-22P-201ENST00000363334 158 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 RNU6-879P-201ENST00000364328 108 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 Y_RNA.387-201ENST00000383918 102 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 RNU6-890P-201ENST00000384121 107 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 SNORD26-201ENST00000384147 75 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 SNORA20B-201ENST00000384220 132 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 RNU6-1297P-201ENST00000384415 104 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 SNORA69.1-201ENST00000390904 137 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 SNORA67.6-201ENST00000391093 99 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 AL355796.1-201ENST00000406706 323 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 MTND4P28-201ENST00000426217 387 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 AC015922.2-201ENST00000435593 184 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 RNU7-152P-201ENST00000458982 64 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 MIR2053-201ENST00000459295 91 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 RNU7-87P-201ENST00000459343 62 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 SNORA40.9-201ENST00000515895 93 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 RNU6-470P-201ENST00000515954 104 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 AC022868.1-201ENST00000517767 391 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 AP002001.1-203ENST00000534002 267 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 AL162424.1-201ENST00000602325 221 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 AC018630.2-201ENST00000534866 2403 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 AC073544.1-201ENST00000600110 1595 ntBASIC1.11□□□□□ -2.23
RPUSD4Q96CM3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 U8.1-201ENST00000362843 134 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 RNA5SP190-201ENST00000365222 118 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 RNY3P4-201ENST00000384428 101 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 MIR562-201ENST00000384894 95 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 SNORA12.1-201ENST00000390873 148 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 MIR1323-201ENST00000408090 73 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 RNU6-1156P-201ENST00000410365 100 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 RN7SKP200-201ENST00000410564 320 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 AC114482.1-201ENST00000418010 247 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 RAB28P5-201ENST00000427490 651 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 AL354695.1-201ENST00000427935 228 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 RPL23AP50-201ENST00000434149 455 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 AC005002.2-201ENST00000438228 269 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 PGBD4P5-201ENST00000445958 426 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 Y_RNA.653-201ENST00000459091 95 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 RNU6-625P-201ENST00000459412 107 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 AC022493.2-201ENST00000506122 481 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 RNU6-559P-201ENST00000516151 98 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 RNU6-264P-201ENST00000517134 104 ntBASIC1.1□□□□□ -2.23
RPUSD4Q96CM3 SNORA31.24-201ENST00000517232 57 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms