Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 AC092989.1-201ENST00000481235 277 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 AC018710.1-201ENST00000506509 158 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 AC026782.1-201ENST00000512952 449 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 RNU6-922P-201ENST00000516753 99 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 RNA5SP404-201ENST00000517118 132 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 RNU7-172P-201ENST00000517125 64 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 CYCSP23-201ENST00000519781 313 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
UFD1Q92890 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.97□□□□□ -2.25
UFD1Q92890 MIR3945-201ENST00000581853 98 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 AL513534.2-201ENST00000603836 250 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 AL022345.2-201ENST00000606307 135 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 AC005014.2-201ENST00000607795 599 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 AC093783.1-201ENST00000612976 329 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 AC027335.2-201ENST00000624030 375 ntBASIC0.97□□□□□ -2.25
UFD1Q92890 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
UFD1Q92890 Y_RNA.473-201ENST00000384333 102 ntBASIC0.96□□□□□ -2.26
UFD1Q92890 RNU6-1215P-201ENST00000384441 102 ntBASIC0.96□□□□□ -2.26
UFD1Q92890 RNU11-5P-201ENST00000391216 129 ntBASIC0.96□□□□□ -2.26
UFD1Q92890 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.96□□□□□ -2.26
UFD1Q92890 RAB28P5-201ENST00000427490 651 ntBASIC0.96□□□□□ -2.26
UFD1Q92890 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.96□□□□□ -2.26
UFD1Q92890 RNU6-1016P-201ENST00000516689 94 ntBASIC0.96□□□□□ -2.26
UFD1Q92890 MIR4778-201ENST00000577635 80 ntBASIC0.96□□□□□ -2.26
UFD1Q92890 MIR3684-201ENST00000579779 74 ntBASIC0.96□□□□□ -2.26
UFD1Q92890 AC018638.8-201ENST00000588755 281 ntBASIC0.96□□□□□ -2.26
UFD1Q92890 HSPE1P19-201ENST00000603327 295 ntBASIC0.96□□□□□ -2.26
UFD1Q92890 BX284668.6-201ENST00000606899 438 ntBASIC0.96□□□□□ -2.26
UFD1Q92890 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
UFD1Q92890 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.26
UFD1Q92890 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
UFD1Q92890 Y_RNA.364-201ENST00000365532 101 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 SNORA70.7-201ENST00000384159 133 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
UFD1Q92890 RNU6-700P-201ENST00000391043 107 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 MIR548F1-201ENST00000408667 84 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 ELOCP21-201ENST00000412558 336 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 RPL23AP36-201ENST00000413895 458 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.95□□□□□ -2.26
UFD1Q92890 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.95□□□□□ -2.26
UFD1Q92890 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.95□□□□□ -2.26
UFD1Q92890 SNORD116-28-201ENST00000516123 91 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 AC105029.1-201ENST00000520250 669 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.95□□□□□ -2.26
UFD1Q92890 RPL21P9-201ENST00000556149 474 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 MIR4421-201ENST00000578133 69 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.95□□□□□ -2.26
UFD1Q92890 AL357075.2-201ENST00000614906 189 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 AL133216.2-202ENST00000634512 349 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 AC073544.1-201ENST00000600110 1595 ntBASIC0.95□□□□□ -2.26
UFD1Q92890 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
UFD1Q92890 Y_RNA.2-201ENST00000362330 96 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 RNU6-199P-201ENST00000362954 107 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 RNU6-593P-201ENST00000364716 112 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 RNU6-407P-201ENST00000365280 104 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 RNU6-1145P-201ENST00000384246 107 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 RNU6-510P-201ENST00000391239 108 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 MTCYBP4-201ENST00000401524 249 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 Y_RNA.594-201ENST00000410373 140 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 AC018865.2-201ENST00000423631 129 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 CALM2P4-201ENST00000430810 426 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 RNU7-87P-201ENST00000459343 62 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 AC091021.1-201ENST00000468051 388 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 RNU6-718P-201ENST00000516166 105 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 RNA5SP168-201ENST00000516642 112 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.94□□□□□ -2.26
UFD1Q92890 MIR4303-201ENST00000581299 66 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 GHRLOS.1-201ENST00000610995 70 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 AC104260.1-201ENST00000616660 539 ntBASIC0.94□□□□□ -2.26
UFD1Q92890 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.94□□□□□ -2.26
UFD1Q92890 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
UFD1Q92890 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
UFD1Q92890 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
UFD1Q92890 RNU6-874P-201ENST00000362390 105 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 SNORA27.1-201ENST00000362604 124 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 RNA5SP361-201ENST00000362686 118 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 Y_RNA.86-201ENST00000363020 111 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 RNU1-124P-201ENST00000363861 145 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 RNU4-40P-201ENST00000364351 143 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 Y_RNA.265-201ENST00000364677 108 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 RNU6-424P-201ENST00000384367 105 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 MIR562-201ENST00000384894 95 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 MIR653-201ENST00000385279 96 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 MIR548K-201ENST00000408406 116 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 AC074085.1-201ENST00000413598 418 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 MTCYBP10-201ENST00000424905 650 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 AL121890.1-201ENST00000435457 205 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 RPS23P4-201ENST00000487908 423 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 OR9P1P-201ENST00000496431 281 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 AC074133.1-201ENST00000515696 183 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 RNA5SP20-201ENST00000515976 84 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 Y_RNA.670-201ENST00000516255 105 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 RNU2-56P-201ENST00000516826 190 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 RNU6-341P-201ENST00000516973 96 ntBASIC0.93□□□□□ -2.26
UFD1Q92890 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.93□□□□□ -2.26
UFD1Q92890 AC091178.2-201ENST00000584401 117 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 343.3 ms