Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU6-801P-201ENST00000364087 105 ntBASIC2.91□□□□□ -1.94
ERCC4Q92889 RNU6-975P-201ENST00000384296 105 ntBASIC2.91□□□□□ -1.94
ERCC4Q92889 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.91□□□□□ -1.94
ERCC4Q92889 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.91□□□□□ -1.94
ERCC4Q92889 AC107393.1-201ENST00000512403 346 ntBASIC2.91□□□□□ -1.94
ERCC4Q92889 RNA5SP282-201ENST00000516355 108 ntBASIC2.91□□□□□ -1.94
ERCC4Q92889 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.91□□□□□ -1.94
ERCC4Q92889 AP002392.1-201ENST00000537692 208 ntBASIC2.91□□□□□ -1.94
ERCC4Q92889 MIR1248-201ENST00000629190 106 ntBASIC2.91□□□□□ -1.94
ERCC4Q92889 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ERCC4Q92889 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
ERCC4Q92889 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
ERCC4Q92889 AC009487.4-201ENST00000624969 3585 ntBASIC2.9□□□□□ -1.94
ERCC4Q92889 RNU6-682P-201ENST00000363843 106 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 RNU6-324P-201ENST00000363957 106 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 RNU6-47P-201ENST00000383866 107 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 Y_RNA.435-201ENST00000384095 112 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 RNU6-918P-201ENST00000391219 106 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 RNU2-48P-201ENST00000410694 191 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 OOSP1P1-201ENST00000423265 274 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 AC024067.1-201ENST00000426199 223 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 AC105272.1-201ENST00000438604 198 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 SUMO1P3-201ENST00000439961 304 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 AL161788.1-201ENST00000441805 169 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 SNORA48.11-201ENST00000517015 89 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 AC136628.3-201ENST00000521868 290 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 AP005660.1-201ENST00000522972 293 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ERCC4Q92889 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.9□□□□□ -1.95
ERCC4Q92889 AC022616.8-201ENST00000533569 253 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.9□□□□□ -1.95
ERCC4Q92889 AL365434.2-201ENST00000607979 234 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 AL449363.1-201ENST00000617815 186 ntBASIC2.9□□□□□ -1.95
ERCC4Q92889 RNU6-653P-201ENST00000363074 106 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 SNORA5B-201ENST00000363786 132 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 Y_RNA.368-201ENST00000365547 113 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 RNU6-710P-201ENST00000410424 105 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 RNU7-57P-201ENST00000459540 60 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 RNU6-221P-201ENST00000459541 99 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 AC114982.1-201ENST00000469402 321 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 SNORA31.11-201ENST00000516528 139 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.89□□□□□ -1.95
ERCC4Q92889 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.89□□□□□ -1.95
ERCC4Q92889 GTF3AP2-201ENST00000557014 266 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 AC009127.3-201ENST00000570531 403 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 MIR5692C2-201ENST00000577959 77 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 MIR4753-201ENST00000585119 83 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 snoZ196.1-201ENST00000625269 89 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.89□□□□□ -1.95
ERCC4Q92889 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
ERCC4Q92889 AL159152.1-201ENST00000635019 2587 ntBASIC2.89□□□□□ -1.95
ERCC4Q92889 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ERCC4Q92889 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ERCC4Q92889 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ERCC4Q92889 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
ERCC4Q92889 RNU6-1020P-201ENST00000363684 107 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 Y_RNA.270-201ENST00000364693 104 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 Y_RNA.510-201ENST00000384511 114 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 RNU6-220P-201ENST00000390919 107 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 AC104332.1-201ENST00000440471 797 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.88□□□□□ -1.95
ERCC4Q92889 AC104389.3-201ENST00000445629 235 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 EEF1B2P7-201ENST00000451177 676 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 CYP2C59P-201ENST00000457790 269 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 AC072026.1-201ENST00000605023 201 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 AL365265.1-201ENST00000621045 234 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.88□□□□□ -1.95
ERCC4Q92889 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ERCC4Q92889 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.87□□□□□ -1.95
ERCC4Q92889 RNU1-23P-201ENST00000363361 144 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 Y_RNA.310-201ENST00000365063 113 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 RNU6-546P-201ENST00000383991 107 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ERCC4Q92889 RNU6-763P-201ENST00000390865 106 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 AL355796.1-201ENST00000406706 323 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 RNU2-52P-201ENST00000410680 190 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 AC007064.1-201ENST00000412238 351 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 AC003685.2-201ENST00000422795 395 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 BTF3P11-201ENST00000426582 477 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.87□□□□□ -1.95
ERCC4Q92889 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.87□□□□□ -1.95
ERCC4Q92889 RNA5SP356-201ENST00000515972 94 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 MIR4308-201ENST00000580634 81 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.87□□□□□ -1.95
ERCC4Q92889 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
ERCC4Q92889 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ERCC4Q92889 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
ERCC4Q92889 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ERCC4Q92889 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
ERCC4Q92889 Y_RNA.262-201ENST00000364641 102 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 Y_RNA.464-201ENST00000384282 110 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 MIR144-201ENST00000384886 86 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 SNORA26.5-201ENST00000391215 123 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 RNU2-32P-201ENST00000411193 191 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 COX6CP10-201ENST00000416832 224 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 AC074290.1-201ENST00000448883 135 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 HMGN2P18-201ENST00000450680 270 ntBASIC2.86□□□□□ -1.95
ERCC4Q92889 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.86□□□□□ -1.95
ERCC4Q92889 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms