Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MIR548B-201ENST00000385247 97 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 MT-TW-201ENST00000387382 68 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 SNORD115-46-201ENST00000390982 71 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.97□□□□□ -2.09
TM9SF4Q92544 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 RPS27P21-201ENST00000486977 252 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 AC074133.1-201ENST00000515696 183 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 RNU6-991P-201ENST00000516168 107 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 RNU6-667P-201ENST00000517186 102 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 AP003733.2-201ENST00000529409 171 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 AC002984.1-201ENST00000591692 448 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.97□□□□□ -2.09
TM9SF4Q92544 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 Y_RNA.193-201ENST00000363979 102 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 RNA5SP138-201ENST00000365098 114 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 SNORA25B-201ENST00000365507 128 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 Y_RNA.376-201ENST00000365638 108 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 Y_RNA.483-201ENST00000384380 101 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 Y_RNA.570-201ENST00000384750 101 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 MIR764-201ENST00000390811 85 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 MIR1283-1-201ENST00000408494 87 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 RNU4-30P-201ENST00000410245 143 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 HMGN2P18-201ENST00000450680 270 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 RPL23AP3-201ENST00000453844 468 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 RNU6-295P-201ENST00000516901 104 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 RNU6-570P-201ENST00000517051 105 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.96□□□□□ -2.1
TM9SF4Q92544 AL161670.1-201ENST00000554348 137 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 RPL17P51-201ENST00000605218 238 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 U4atac.1-201ENST00000618345 95 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 MIR8062-201ENST00000621515 85 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 AC091932.3-201ENST00000624223 323 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
TM9SF4Q92544 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TM9SF4Q92544 LINC02555-201ENST00000563933 1951 ntBASIC1.96□□□□□ -2.1
TM9SF4Q92544 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.96□□□□□ -2.1
TM9SF4Q92544 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
TM9SF4Q92544 MIR340-201ENST00000362125 95 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 Y_RNA.101-201ENST00000363154 102 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 RNU6-454P-201ENST00000364292 107 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 Y_RNA.461-201ENST00000384263 103 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 Y_RNA.498-201ENST00000384460 102 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 RNU1-148P-201ENST00000384472 162 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 MIR586-201ENST00000385035 97 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 Y_RNA.602-201ENST00000410535 92 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 RNU2-40P-201ENST00000410833 196 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 AC016717.1-201ENST00000448918 286 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 AC016925.1-201ENST00000458303 298 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 RNA5SP458-201ENST00000516188 119 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 RNU6-107P-201ENST00000516643 102 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 Y_RNA.713-201ENST00000517013 96 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 RNA5SP490-201ENST00000517141 136 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.95□□□□□ -2.1
TM9SF4Q92544 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.95□□□□□ -2.1
TM9SF4Q92544 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.95□□□□□ -2.1
TM9SF4Q92544 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.95□□□□□ -2.1
TM9SF4Q92544 MIR3149-201ENST00000584629 83 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.95□□□□□ -2.1
TM9SF4Q92544 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.95□□□□□ -2.1
TM9SF4Q92544 AL359851.1-201ENST00000569460 4997 ntBASIC1.95□□□□□ -2.1
TM9SF4Q92544 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TM9SF4Q92544 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TM9SF4Q92544 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.94□□□□□ -2.1
TM9SF4Q92544 Y_RNA.16-201ENST00000362421 102 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 SNORD113-8-201ENST00000363497 74 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 SNORD31B-201ENST00000364977 69 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 RNU6-1175P-201ENST00000365200 107 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 RNU6-1026P-201ENST00000384465 108 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 RNU6-713P-201ENST00000384761 107 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 MIR583-201ENST00000384846 75 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 SNORA26.9-201ENST00000391322 122 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 RNA5SP270-201ENST00000411361 118 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 AL445646.1-201ENST00000431784 216 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
TM9SF4Q92544 HSPE1P25-201ENST00000455484 251 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.94□□□□□ -2.1
TM9SF4Q92544 SNORA4.4-201ENST00000515921 135 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 RNU6-496P-201ENST00000516145 99 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 CYCSP23-201ENST00000519781 313 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 AC005176.2-201ENST00000596933 147 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 AC022202.1-201ENST00000613515 211 ntBASIC1.94□□□□□ -2.1
TM9SF4Q92544 AL356292.1-201ENST00000283110 373 ntBASIC1.93□□□□□ -2.1
TM9SF4Q92544 MIR410-201ENST00000362222 80 ntBASIC1.93□□□□□ -2.1
TM9SF4Q92544 Y_RNA.84-201ENST00000363011 104 ntBASIC1.93□□□□□ -2.1
TM9SF4Q92544 U3.8-201ENST00000363675 217 ntBASIC1.93□□□□□ -2.1
TM9SF4Q92544 RNU6-1264P-201ENST00000383891 107 ntBASIC1.93□□□□□ -2.1
TM9SF4Q92544 Y_RNA.452-201ENST00000384202 108 ntBASIC1.93□□□□□ -2.1
TM9SF4Q92544 SNORD63-201ENST00000384262 68 ntBASIC1.93□□□□□ -2.1
TM9SF4Q92544 Y_RNA.541-201ENST00000384640 113 ntBASIC1.93□□□□□ -2.1
TM9SF4Q92544 MIR561-201ENST00000385216 97 ntBASIC1.93□□□□□ -2.1
TM9SF4Q92544 Y_RNA.581-201ENST00000391017 97 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms