Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MIR891A-201ENST00000401237 79 ntBASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 RPL21P65-201ENST00000406094 466 ntBASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 Y_RNA.621-201ENST00000411065 96 ntBASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 RPL23AP83-201ENST00000434984 473 ntBASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 TRBV12-2-201ENST00000489763 344 ntBASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 RNU1-104P-201ENST00000517280 175 ntBASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 AC007751.1-201ENST00000529260 376 ntBASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 RN7SL600P-201ENST00000581811 299 ntBASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 AL606490.9-201ENST00000603331 271 ntBASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 PWAR6-201ENST00000552334 4618 ntBASIC3.57□□□□□ -1.84
DEPDC4Q8N2C3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 RNU6-525P-201ENST00000363685 104 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 SNORD46.1-201ENST00000364139 104 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 RNU6-1292P-201ENST00000383856 107 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 SNORD24-201ENST00000383884 75 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 Y_RNA.525-201ENST00000384570 113 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 CYCSP19-201ENST00000411715 316 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 MLLT10P1-201ENST00000418346 262 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 MTATP6P21-201ENST00000440681 189 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 RNU7-94P-201ENST00000459576 63 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 Y_RNA.690-201ENST00000516603 95 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 RNU1-142P-201ENST00000516682 145 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 RNU2-60P-201ENST00000517290 128 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 AC024995.1-201ENST00000523014 93 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 MIR5047-201ENST00000579212 100 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 MIR6867-201ENST00000610636 67 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 RNVU1-4-201ENST00000612985 164 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 MIR7151-201ENST00000617477 60 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 U4atac.1-201ENST00000618345 95 ntBASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.56□□□□□ -1.84
DEPDC4Q8N2C3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 RNU6-429P-201ENST00000384582 108 ntBASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 SNRPGP10-201ENST00000432323 225 ntBASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 MRPS17P9-201ENST00000511924 393 ntBASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 Y_RNA.714-201ENST00000517065 90 ntBASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 U6.108-201ENST00000637764 58 ntBASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
DEPDC4Q8N2C3 AL161912.2-201ENST00000565707 3007 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 ZNF271P-202ENST00000465539 1970 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 SNORA71.3-201ENST00000362582 128 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 MIR200C-201ENST00000384980 68 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 RNY4P18-201ENST00000391107 89 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 Y_RNA.617-201ENST00000410920 90 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 EDDM3CP-201ENST00000415977 425 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 AC002075.2-201ENST00000425207 252 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 AC006028.1-201ENST00000438379 402 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 RPL21P10-201ENST00000463521 490 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 RPS26P45-201ENST00000471748 340 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 RNU6-1041P-201ENST00000516254 102 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 MIR6875-201ENST00000617506 72 ntBASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.54□□□□□ -1.84
DEPDC4Q8N2C3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 Y_RNA.52-201ENST00000362760 96 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 RNA5SP399-201ENST00000364003 117 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 RNU6-160P-201ENST00000384591 107 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 SNORA40.5-201ENST00000391061 128 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 RNA5SP467-201ENST00000391274 118 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 GOT2P5-201ENST00000433995 546 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 ATP5J2P3-201ENST00000451550 258 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 AC233266.1-201ENST00000454518 96 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 AC091826.1-201ENST00000514065 313 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 Y_RNA.709-201ENST00000516952 92 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 AC133485.4-201ENST00000561835 220 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 AC138907.4-201ENST00000570107 226 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 AC008507.4-201ENST00000585464 127 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 AL137849.1-201ENST00000604767 169 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 AC242852.1-201ENST00000612151 96 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 AC244015.1-201ENST00000622301 99 ntBASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.53□□□□□ -1.84
DEPDC4Q8N2C3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.85
DEPDC4Q8N2C3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
DEPDC4Q8N2C3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
DEPDC4Q8N2C3 RNU6-888P-201ENST00000363010 101 ntBASIC3.52□□□□□ -1.85
DEPDC4Q8N2C3 RNA5SP97-201ENST00000365006 84 ntBASIC3.52□□□□□ -1.85
DEPDC4Q8N2C3 MIR184-201ENST00000384962 84 ntBASIC3.52□□□□□ -1.85
DEPDC4Q8N2C3 MIR449B-201ENST00000384995 97 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms